PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status Best Target
hippophae_rhamnoides_Hiprha1gene00124 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene01372 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene02124 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene07409 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene08459 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene11950 Alkaloid T16H low borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene12434 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene13075 Alkaloid T16H low borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene13212 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene14073 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene14787 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene16395 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene16716 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene16727 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene17986 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene18637 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene19211 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene19465 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene19531 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene19646 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene22698 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene22853 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene24832 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene24855 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
hippophae_rhamnoides_Hiprha1gene25036 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
hippophae_rhamnoides_Hiprha1gene28422 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO