PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene00153 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene00698 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene01153 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene01298 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene02058 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene02135 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene03074 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene03797 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene04305 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene04630 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene05240 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene05245 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene05246 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene05498 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene05740 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene06040 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene06173 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene06315 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene06487 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene06514 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene06567 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene06772 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene07154 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene07162 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene07163 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene07256 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene09265 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene09266 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene10219 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene10542 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene11344 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene12377 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene12922 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene13028 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene13048 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene13063 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene14408 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene15023 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene15707 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene15935 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene16265 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene17092 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene19027 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene19129 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene19467 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene19534 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene19536 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene19537 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene19656 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene19916 Alkaloid T3O medium borderline