Hippophae rhamnoides (hippophae_rhamnoides)
Imported from atlas release summary for Hippophae rhamnoides.
1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1269
Candidate Genes
BAHD
6.04%
C4H
5.59%
C3'H/CYP98A
5.4%
POD
4.8%
4CL
4.0%
UGT
3.53%
CYP76
3.46%
7DLGT
3.21%
Other Families
63.98%
More Families (96)
F3H
101
3.21%
IFS
101
3.21%
UFGT
96
3.05%
NMT
87
2.76%
T3O
82
2.6%
CODM/T6ODM
67
2.13%
DWF4/CYP90B1
66
2.1%
STR
58
1.84%
H6H
55
1.75%
BR6OX2/CYP85A2
52
1.65%
CAD
50
1.59%
F3'H/CYP75B
49
1.56%
LAC
48
1.52%
SMT1/SMT2/SMT3
42
1.33%
TPS
42
1.33%
TRI/TRII
41
1.3%
CYP71
40
1.27%
IFR
39
1.24%
CSE
39
1.24%
HCT
37
1.18%
CAS
35
1.11%
GES
34
1.08%
7DLH
28
0.89%
PYKS
27
0.86%
F3'5'H/CYP75A
27
0.86%
COMT
27
0.86%
T16H
26
0.83%
CYP90D1
26
0.83%
G8O/G8H
24
0.76%
IO
23
0.73%
PMT
23
0.73%
RAS
23
0.73%
TAT
23
0.73%
GS
21
0.67%
CCR
21
0.67%
ANR
19
0.6%
F5H/CYP84A
19
0.6%
SGD
18
0.57%
16OMT
17
0.54%
FNS
17
0.54%
BBE
16
0.51%
LAMT
15
0.48%
PAL
15
0.48%
CYP51G1
15
0.48%
ANS/LDOX
14
0.44%
CPD/CYP90A1
14
0.44%
BR6OX1/CYP85A1
14
0.44%
NCS
13
0.41%
DFR
13
0.41%
SLS
12
0.38%
CNMT
11
0.35%
ROT3/CYP90C1
10
0.32%
CHS
9
0.29%
CCoAOMT
9
0.29%
8HGO
8
0.25%
MPO
8
0.25%
CPR
8
0.25%
SQE
8
0.25%
DXS
8
0.25%
COR
7
0.22%
ISY
7
0.22%
SQS/FDFT1
7
0.22%
GGPPS
7
0.22%
HPPR
6
0.19%
DET2
6
0.19%
AACT
6
0.19%
CYP80B1
5
0.16%
TYDC_DDC
5
0.16%
HMGR
5
0.16%
FPPS
5
0.16%
MVK
5
0.16%
CYP719
4
0.13%
SMO1/SMO2
4
0.13%
MVD
4
0.13%
PMK
4
0.13%
ADC
3
0.1%
CHI
3
0.1%
DWF7
3
0.1%
HMGS
3
0.1%
6OMT_4OMT_SOMT
2
0.06%
DWF1
2
0.06%
MDS/IspF
2
0.06%
HDS/IspG
2
0.06%
IDI
2
0.06%
CMK/IspE
2
0.06%
MCT/IspD
2
0.06%
HDR/IspH
2
0.06%
XMT_MXMT_DXMT
1
0.03%
ODC
1
0.03%
TDC
1
0.03%
CPI1
1
0.03%
HYD1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
GPPS
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 373 | 19 | BAHD (149) | View species results |
| Phenylpropanoid pathway | 305 | 12 | POD (142) | View species results |
| Alkaloid pathway | 254 | 20 | NMT (52) | View species results |
| Flavonoid pathway | 155 | 10 | UFGT (87) | View species results |
| Rosmarinic acid pathway | 107 | 7 | C4H (40) | View species results |
| Steroid pathway | 75 | 14 | CAS (27) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1092 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 250 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| hippophae_rhamnoides_Hiprha1gene00040 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| hippophae_rhamnoides_Hiprha1gene00041 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| hippophae_rhamnoides_Hiprha1gene00725 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| hippophae_rhamnoides_Hiprha1gene00939 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| hippophae_rhamnoides_Hiprha1gene00949 | Terpenoid | BAHD | medium | pass | BAHD__00071__sp_Q9CAY3_GPAT5_ARATH |
| hippophae_rhamnoides_Hiprha1gene00955 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| hippophae_rhamnoides_Hiprha1gene01019 | Terpenoid | BAHD | medium | pass | BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF |
| hippophae_rhamnoides_Hiprha1gene01143 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| hippophae_rhamnoides_Hiprha1gene01323 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| hippophae_rhamnoides_Hiprha1gene01331 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| hippophae_rhamnoides_Hiprha1gene01580 | Terpenoid | BAHD | low | borderline | BAHD__00024__sp_O23393_BIA1_ARATH |
| hippophae_rhamnoides_Hiprha1gene01981 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| hippophae_rhamnoides_Hiprha1gene02016 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| hippophae_rhamnoides_Hiprha1gene02121 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| hippophae_rhamnoides_Hiprha1gene02170 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| hippophae_rhamnoides_Hiprha1gene02248 | Terpenoid | BAHD | medium | pass | BAHD__00024__sp_O23393_BIA1_ARATH |
| hippophae_rhamnoides_Hiprha1gene02329 | Terpenoid | BAHD | medium | pass | BAHD__00024__sp_O23393_BIA1_ARATH |
| hippophae_rhamnoides_Hiprha1gene02339 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| hippophae_rhamnoides_Hiprha1gene02634 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| hippophae_rhamnoides_Hiprha1gene02645 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| hippophae_rhamnoides_Hiprha1gene02866 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| hippophae_rhamnoides_Hiprha1gene02953 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| hippophae_rhamnoides_Hiprha1gene02989 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| hippophae_rhamnoides_Hiprha1gene03178 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| hippophae_rhamnoides_Hiprha1gene03226 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| hippophae_rhamnoides_Hiprha1gene03415 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| hippophae_rhamnoides_Hiprha1gene03669 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| hippophae_rhamnoides_Hiprha1gene03705 | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| hippophae_rhamnoides_Hiprha1gene03995 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| hippophae_rhamnoides_Hiprha1gene04569 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| hippophae_rhamnoides_Hiprha1gene04736 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| hippophae_rhamnoides_Hiprha1gene04852 | Terpenoid | BAHD | medium | pass | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| hippophae_rhamnoides_Hiprha1gene04900 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| hippophae_rhamnoides_Hiprha1gene05219 | Terpenoid | BAHD | medium | pass | BAHD__00076__sp_Q9FLM3_ZDH23_ARATH |
| hippophae_rhamnoides_Hiprha1gene05637 | Terpenoid | BAHD | medium | pass | BAHD__00031__sp_P0DO25_AT9_ACTDE |
| hippophae_rhamnoides_Hiprha1gene05647 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| hippophae_rhamnoides_Hiprha1gene05656 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| hippophae_rhamnoides_Hiprha1gene06035 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| hippophae_rhamnoides_Hiprha1gene06169 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| hippophae_rhamnoides_Hiprha1gene06195 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| hippophae_rhamnoides_Hiprha1gene06204 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| hippophae_rhamnoides_Hiprha1gene06271 | Terpenoid | BAHD | low | borderline | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| hippophae_rhamnoides_Hiprha1gene06322 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| hippophae_rhamnoides_Hiprha1gene06380 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| hippophae_rhamnoides_Hiprha1gene06687 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| hippophae_rhamnoides_Hiprha1gene06909 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| hippophae_rhamnoides_Hiprha1gene06990 | Terpenoid | BAHD | medium | pass | BAHD__00086__sp_Q9M306_ZDH10_ARATH |
| hippophae_rhamnoides_Hiprha1gene07160 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| hippophae_rhamnoides_Hiprha1gene07361 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| hippophae_rhamnoides_Hiprha1gene07679 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |