Hippophae rhamnoides (hippophae_rhamnoides)
Imported from atlas release summary for Hippophae rhamnoides.
1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1269
Candidate Genes
BAHD
6.04%
C4H
5.59%
C3'H/CYP98A
5.4%
POD
4.8%
4CL
4.0%
UGT
3.53%
CYP76
3.46%
7DLGT
3.21%
Other Families
63.98%
More Families (96)
F3H
101
3.21%
IFS
101
3.21%
UFGT
96
3.05%
NMT
87
2.76%
T3O
82
2.6%
CODM/T6ODM
67
2.13%
DWF4/CYP90B1
66
2.1%
STR
58
1.84%
H6H
55
1.75%
BR6OX2/CYP85A2
52
1.65%
CAD
50
1.59%
F3'H/CYP75B
49
1.56%
LAC
48
1.52%
SMT1/SMT2/SMT3
42
1.33%
TPS
42
1.33%
TRI/TRII
41
1.3%
CYP71
40
1.27%
IFR
39
1.24%
CSE
39
1.24%
HCT
37
1.18%
CAS
35
1.11%
GES
34
1.08%
7DLH
28
0.89%
PYKS
27
0.86%
F3'5'H/CYP75A
27
0.86%
COMT
27
0.86%
T16H
26
0.83%
CYP90D1
26
0.83%
G8O/G8H
24
0.76%
IO
23
0.73%
PMT
23
0.73%
RAS
23
0.73%
TAT
23
0.73%
GS
21
0.67%
CCR
21
0.67%
ANR
19
0.6%
F5H/CYP84A
19
0.6%
SGD
18
0.57%
16OMT
17
0.54%
FNS
17
0.54%
BBE
16
0.51%
LAMT
15
0.48%
PAL
15
0.48%
CYP51G1
15
0.48%
ANS/LDOX
14
0.44%
CPD/CYP90A1
14
0.44%
BR6OX1/CYP85A1
14
0.44%
NCS
13
0.41%
DFR
13
0.41%
SLS
12
0.38%
CNMT
11
0.35%
ROT3/CYP90C1
10
0.32%
CHS
9
0.29%
CCoAOMT
9
0.29%
8HGO
8
0.25%
MPO
8
0.25%
CPR
8
0.25%
SQE
8
0.25%
DXS
8
0.25%
COR
7
0.22%
ISY
7
0.22%
SQS/FDFT1
7
0.22%
GGPPS
7
0.22%
HPPR
6
0.19%
DET2
6
0.19%
AACT
6
0.19%
CYP80B1
5
0.16%
TYDC_DDC
5
0.16%
HMGR
5
0.16%
FPPS
5
0.16%
MVK
5
0.16%
CYP719
4
0.13%
SMO1/SMO2
4
0.13%
MVD
4
0.13%
PMK
4
0.13%
ADC
3
0.1%
CHI
3
0.1%
DWF7
3
0.1%
HMGS
3
0.1%
6OMT_4OMT_SOMT
2
0.06%
DWF1
2
0.06%
MDS/IspF
2
0.06%
HDS/IspG
2
0.06%
IDI
2
0.06%
CMK/IspE
2
0.06%
MCT/IspD
2
0.06%
HDR/IspH
2
0.06%
XMT_MXMT_DXMT
1
0.03%
ODC
1
0.03%
TDC
1
0.03%
CPI1
1
0.03%
HYD1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
GPPS
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 373 | 19 | BAHD (149) | View species results |
| Phenylpropanoid pathway | 305 | 12 | POD (142) | View species results |
| Alkaloid pathway | 254 | 20 | NMT (52) | View species results |
| Flavonoid pathway | 155 | 10 | UFGT (87) | View species results |
| Rosmarinic acid pathway | 107 | 7 | C4H (40) | View species results |
| Steroid pathway | 75 | 14 | CAS (27) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1092 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 250 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| hippophae_rhamnoides_Hiprha1gene19825 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| hippophae_rhamnoides_Hiprha1gene20222 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| hippophae_rhamnoides_Hiprha1gene20457 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| hippophae_rhamnoides_Hiprha1gene20598 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| hippophae_rhamnoides_Hiprha1gene20703 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| hippophae_rhamnoides_Hiprha1gene20705 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| hippophae_rhamnoides_Hiprha1gene20941 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| hippophae_rhamnoides_Hiprha1gene21118 | Phenylpropanoid | POD | medium | pass | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| hippophae_rhamnoides_Hiprha1gene21437 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| hippophae_rhamnoides_Hiprha1gene21594 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene22072 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| hippophae_rhamnoides_Hiprha1gene22497 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| hippophae_rhamnoides_Hiprha1gene23262 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| hippophae_rhamnoides_Hiprha1gene23392 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene23427 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| hippophae_rhamnoides_Hiprha1gene23659 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene23815 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| hippophae_rhamnoides_Hiprha1gene24304 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| hippophae_rhamnoides_Hiprha1gene24476 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| hippophae_rhamnoides_Hiprha1gene24485 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene24646 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene24839 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| hippophae_rhamnoides_Hiprha1gene24924 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| hippophae_rhamnoides_Hiprha1gene25177 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| hippophae_rhamnoides_Hiprha1gene25224 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| hippophae_rhamnoides_Hiprha1gene25338 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| hippophae_rhamnoides_Hiprha1gene25618 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene25643 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| hippophae_rhamnoides_Hiprha1gene25722 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| hippophae_rhamnoides_Hiprha1gene25758 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| hippophae_rhamnoides_Hiprha1gene25882 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| hippophae_rhamnoides_Hiprha1gene26048 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| hippophae_rhamnoides_Hiprha1gene26369 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene26733 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene27235 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| hippophae_rhamnoides_Hiprha1gene27261 | Phenylpropanoid | POD | low | borderline | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| hippophae_rhamnoides_Hiprha1gene27288 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| hippophae_rhamnoides_Hiprha1gene27289 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| hippophae_rhamnoides_Hiprha1gene27357 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| hippophae_rhamnoides_Hiprha1gene27961 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| hippophae_rhamnoides_Hiprha1gene27989 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene27991 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene27993 | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene28635 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| hippophae_rhamnoides_Hiprha1gene29358 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| hippophae_rhamnoides_Hiprha1gene29937 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| hippophae_rhamnoides_Hiprha1gene30228 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| hippophae_rhamnoides_Hiprha1gene30336 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| hippophae_rhamnoides_Hiprha1gene30457 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| hippophae_rhamnoides_Hiprha1gene30494 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |