PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene00448 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene00944 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene01091 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene01828 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene03440 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene04179 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene05447 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene05555 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene05560 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene05577 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene05758 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene06055 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene06887 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene07031 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene07375 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene09122 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene09444 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene09802 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene10050 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene12125 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene13070 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene14430 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene16122 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17083 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17482 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17533 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene17667 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17840 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17965 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene18647 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene20411 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene22113 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene22804 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene23082 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene23131 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene23546 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene23966 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene25834 Flavonoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene26900 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene26961 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene30629 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene30714 Flavonoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene02920 Flavonoid ANR medium borderline
hippophae_rhamnoides_Hiprha1gene04216 Flavonoid ANR medium borderline
hippophae_rhamnoides_Hiprha1gene04499 Flavonoid ANR medium borderline
hippophae_rhamnoides_Hiprha1gene06643 Flavonoid ANR low borderline
hippophae_rhamnoides_Hiprha1gene09619 Flavonoid ANR medium borderline
hippophae_rhamnoides_Hiprha1gene11285 Flavonoid ANR medium borderline
hippophae_rhamnoides_Hiprha1gene12846 Flavonoid ANR low borderline
hippophae_rhamnoides_Hiprha1gene13700 Flavonoid ANR medium borderline