Hippophae rhamnoides (hippophae_rhamnoides)
Imported from atlas release summary for Hippophae rhamnoides.
1621
Candidate Protein Records
1269
Pathway-Level Records
3148
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3148
Family-Level Calls
BAHD
6.04%
C4H
5.59%
C3'H/CYP98A
5.4%
POD
4.8%
4CL
4.0%
UGT
3.53%
CYP76
3.46%
7DLGT
3.21%
Other Families
63.98%
More Families (96)
F3H
101
3.21%
IFS
101
3.21%
UFGT
96
3.05%
NMT
87
2.76%
T3O
82
2.6%
CODM/T6ODM
67
2.13%
DWF4/CYP90B1
66
2.1%
STR
58
1.84%
H6H
55
1.75%
BR6OX2/CYP85A2
52
1.65%
CAD
50
1.59%
F3'H/CYP75B
49
1.56%
LAC
48
1.52%
SMT1/SMT2/SMT3
42
1.33%
TPS
42
1.33%
TRI/TRII
41
1.3%
CYP71
40
1.27%
IFR
39
1.24%
CSE
39
1.24%
HCT
37
1.18%
CAS
35
1.11%
GES
34
1.08%
7DLH
28
0.89%
PYKS
27
0.86%
F3'5'H/CYP75A
27
0.86%
COMT
27
0.86%
T16H
26
0.83%
CYP90D1
26
0.83%
G8O/G8H
24
0.76%
IO
23
0.73%
PMT
23
0.73%
RAS
23
0.73%
TAT
23
0.73%
GS
21
0.67%
CCR
21
0.67%
ANR
19
0.6%
F5H/CYP84A
19
0.6%
SGD
18
0.57%
16OMT
17
0.54%
FNS
17
0.54%
BBE
16
0.51%
LAMT
15
0.48%
PAL
15
0.48%
CYP51G1
15
0.48%
ANS/LDOX
14
0.44%
CPD/CYP90A1
14
0.44%
BR6OX1/CYP85A1
14
0.44%
NCS
13
0.41%
DFR
13
0.41%
SLS
12
0.38%
CNMT
11
0.35%
ROT3/CYP90C1
10
0.32%
CHS
9
0.29%
CCoAOMT
9
0.29%
8HGO
8
0.25%
MPO
8
0.25%
CPR
8
0.25%
SQE
8
0.25%
DXS
8
0.25%
COR
7
0.22%
ISY
7
0.22%
SQS/FDFT1
7
0.22%
GGPPS
7
0.22%
HPPR
6
0.19%
DET2
6
0.19%
AACT
6
0.19%
CYP80B1
5
0.16%
TYDC_DDC
5
0.16%
HMGR
5
0.16%
FPPS
5
0.16%
MVK
5
0.16%
CYP719
4
0.13%
SMO1/SMO2
4
0.13%
MVD
4
0.13%
PMK
4
0.13%
ADC
3
0.1%
CHI
3
0.1%
DWF7
3
0.1%
HMGS
3
0.1%
6OMT_4OMT_SOMT
2
0.06%
DWF1
2
0.06%
MDS/IspF
2
0.06%
HDS/IspG
2
0.06%
IDI
2
0.06%
CMK/IspE
2
0.06%
MCT/IspD
2
0.06%
HDR/IspH
2
0.06%
XMT_MXMT_DXMT
1
0.03%
ODC
1
0.03%
TDC
1
0.03%
CPI1
1
0.03%
HYD1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
GPPS
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 373 | 19 | BAHD (149) | View species results |
| Phenylpropanoid pathway | 305 | 12 | POD (142) | View species results |
| Alkaloid pathway | 254 | 20 | NMT (52) | View species results |
| Flavonoid pathway | 155 | 10 | UFGT (87) | View species results |
| Rosmarinic acid pathway | 107 | 7 | C4H (40) | View species results |
| Steroid pathway | 75 | 14 | CAS (27) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1092 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 250 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| hippophae_rhamnoides_Hiprha1gene24183 | Alkaloid | PYKS | low | borderline |
| hippophae_rhamnoides_Hiprha1gene24723 | Alkaloid | PYKS | low | borderline |
| hippophae_rhamnoides_Hiprha1gene25249 | Alkaloid | PYKS | high | pass |
| hippophae_rhamnoides_Hiprha1gene26343 | Alkaloid | PYKS | low | borderline |
| hippophae_rhamnoides_Hiprha1gene28597 | Alkaloid | PYKS | high | pass |
| hippophae_rhamnoides_Hiprha1gene28739 | Alkaloid | PYKS | low | borderline |
| hippophae_rhamnoides_Hiprha1gene30592 | Alkaloid | PYKS | high | pass |
| hippophae_rhamnoides_Hiprha1gene07398 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene08445 | Alkaloid | SGD | low | borderline |
| hippophae_rhamnoides_Hiprha1gene09213 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene10640 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene15227 | Alkaloid | SGD | low | borderline |
| hippophae_rhamnoides_Hiprha1gene17932 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene18027 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene18479 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene19200 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene19330 | Alkaloid | SGD | low | borderline |
| hippophae_rhamnoides_Hiprha1gene19740 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene20667 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene20819 | Alkaloid | SGD | low | borderline |
| hippophae_rhamnoides_Hiprha1gene21298 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene21450 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene22305 | Alkaloid | SGD | medium | pass |
| hippophae_rhamnoides_Hiprha1gene26214 | Alkaloid | SGD | low | borderline |
| hippophae_rhamnoides_Hiprha1gene30742 | Alkaloid | SGD | low | borderline |
| hippophae_rhamnoides_Hiprha1gene00479 | Alkaloid | SLS | low | borderline |
| hippophae_rhamnoides_Hiprha1gene05036 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene05332 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene05351 | Alkaloid | SLS | low | borderline |
| hippophae_rhamnoides_Hiprha1gene08596 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene11236 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene11870 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene12191 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene26259 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene28699 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene29250 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene30108 | Alkaloid | SLS | medium | borderline |
| hippophae_rhamnoides_Hiprha1gene00375 | Alkaloid | STR | low | borderline |
| hippophae_rhamnoides_Hiprha1gene00682 | Alkaloid | STR | low | borderline |
| hippophae_rhamnoides_Hiprha1gene00839 | Alkaloid | STR | low | borderline |
| hippophae_rhamnoides_Hiprha1gene00895 | Alkaloid | STR | medium | pass |
| hippophae_rhamnoides_Hiprha1gene01755 | Alkaloid | STR | low | borderline |
| hippophae_rhamnoides_Hiprha1gene02316 | Alkaloid | STR | medium | pass |
| hippophae_rhamnoides_Hiprha1gene02402 | Alkaloid | STR | low | borderline |
| hippophae_rhamnoides_Hiprha1gene04158 | Alkaloid | STR | medium | pass |
| hippophae_rhamnoides_Hiprha1gene05179 | Alkaloid | STR | low | borderline |
| hippophae_rhamnoides_Hiprha1gene05600 | Alkaloid | STR | low | borderline |
| hippophae_rhamnoides_Hiprha1gene06295 | Alkaloid | STR | low | borderline |
| hippophae_rhamnoides_Hiprha1gene06775 | Alkaloid | STR | low | borderline |
| hippophae_rhamnoides_Hiprha1gene07281 | Alkaloid | STR | low | borderline |