PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1621
Candidate Protein Records
1269
Pathway-Level Records
3148
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene11950 Alkaloid T16H low borderline
hippophae_rhamnoides_Hiprha1gene12434 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene13075 Alkaloid T16H low borderline
hippophae_rhamnoides_Hiprha1gene13212 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene14073 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene14787 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene16395 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene16716 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene16727 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene17986 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene18637 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene19211 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene19465 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene19531 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene19646 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene22698 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene22853 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene24832 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene24855 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene25036 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene28422 Alkaloid T16H medium borderline
hippophae_rhamnoides_Hiprha1gene00153 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene00698 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene01153 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene01298 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene02058 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene02135 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene03074 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene03797 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene04305 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene04630 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene05240 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene05245 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene05246 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene05498 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene05740 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene06040 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene06173 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene06315 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene06487 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene06514 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene06567 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene06772 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene07154 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene07162 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene07163 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene07256 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene09265 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene09266 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene10219 Alkaloid T3O low borderline