PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1621
Candidate Protein Records
1269
Pathway-Level Records
3148
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene13665 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene13666 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene13668 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene13670 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene16527 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene17689 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene17729 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene17730 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene17733 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene17878 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene17942 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene19540 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene23168 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene24318 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene24319 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene24561 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene24562 Alkaloid GES low borderline
hippophae_rhamnoides_Hiprha1gene24563 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene24564 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene24565 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene24568 Alkaloid GES low borderline
hippophae_rhamnoides_Hiprha1gene24569 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene25164 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene25748 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene25749 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene25783 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene28405 Alkaloid GES medium pass
hippophae_rhamnoides_Hiprha1gene00152 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene03540 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene03890 Alkaloid GS high pass
hippophae_rhamnoides_Hiprha1gene05697 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene05774 Alkaloid GS medium pass
hippophae_rhamnoides_Hiprha1gene05777 Alkaloid GS medium pass
hippophae_rhamnoides_Hiprha1gene07240 Alkaloid GS high pass
hippophae_rhamnoides_Hiprha1gene09439 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene09440 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene09843 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene13891 Alkaloid GS high pass
hippophae_rhamnoides_Hiprha1gene14070 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene15032 Alkaloid GS high pass
hippophae_rhamnoides_Hiprha1gene16829 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene19274 Alkaloid GS medium pass
hippophae_rhamnoides_Hiprha1gene21193 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene22346 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene25624 Alkaloid GS low borderline
hippophae_rhamnoides_Hiprha1gene26562 Alkaloid GS high pass
hippophae_rhamnoides_Hiprha1gene27552 Alkaloid GS medium pass
hippophae_rhamnoides_Hiprha1gene29922 Alkaloid GS high pass
hippophae_rhamnoides_Hiprha1gene01118 Alkaloid H6H medium pass
hippophae_rhamnoides_Hiprha1gene01124 Alkaloid H6H medium borderline