PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1621
Candidate Protein Records
1269
Pathway-Level Records
3148
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene19536 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene19537 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene19611 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene19656 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene19916 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene20375 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene20998 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene21059 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene21260 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene21593 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene21696 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene21828 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene21842 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene22043 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene22048 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene22284 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene22316 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene22464 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene22475 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene22697 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene23550 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene23716 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene24073 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene25036 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene25037 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene25111 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene25466 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene25678 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene26065 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene26199 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene26393 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene26456 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene26707 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene27049 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene27156 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene27438 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene27461 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene27666 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene29671 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene30414 Flavonoid IFS medium borderline
hippophae_rhamnoides_Hiprha1gene30516 Flavonoid IFS low borderline
hippophae_rhamnoides_Hiprha1gene00928 Flavonoid PAL high pass
hippophae_rhamnoides_Hiprha1gene02607 Flavonoid PAL high pass
hippophae_rhamnoides_Hiprha1gene04850 Flavonoid PAL high pass
hippophae_rhamnoides_Hiprha1gene09274 Flavonoid PAL high pass
hippophae_rhamnoides_Hiprha1gene28728 Flavonoid PAL high pass
hippophae_rhamnoides_Hiprha1gene00248 Flavonoid UFGT high pass
hippophae_rhamnoides_Hiprha1gene00319 Flavonoid UFGT medium pass
hippophae_rhamnoides_Hiprha1gene00899 Flavonoid UFGT medium pass
hippophae_rhamnoides_Hiprha1gene01071 Flavonoid UFGT high pass