Homaliodendron scalpellifolium (homaliodendron_scalpellifolium)
Imported from atlas release summary for Homaliodendron scalpellifolium.
1068
Candidate Protein Records
784
Pathway-Level Records
2061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2061
Family-Level Calls
C4H
7.04%
C3'H/CYP98A
5.68%
BAHD
5.39%
POD
5.0%
4CL
4.8%
CYP76
4.61%
PAL
3.78%
NMT
3.4%
Other Families
60.31%
More Families (97)
IFS
67
3.25%
DWF4/CYP90B1
55
2.67%
F3'H/CYP75B
47
2.28%
BR6OX2/CYP85A2
47
2.28%
T3O
44
2.13%
F3H
44
2.13%
STR
43
2.09%
IFR
41
1.99%
UGT
38
1.84%
7DLGT
33
1.6%
GS
33
1.6%
PYKS
30
1.46%
UFGT
30
1.46%
CAD
30
1.46%
COMT
28
1.36%
IO
27
1.31%
CODM/T6ODM
26
1.26%
G8O/G8H
21
1.02%
TRI/TRII
21
1.02%
CHS
20
0.97%
SMT1/SMT2/SMT3
20
0.97%
CYP71
19
0.92%
7DLH
18
0.87%
H6H
18
0.87%
CAS
18
0.87%
F3'5'H/CYP75A
17
0.82%
CYP90D1
17
0.82%
LAMT
16
0.78%
SLS
16
0.78%
16OMT
16
0.78%
CSE
16
0.78%
T16H
15
0.73%
NCS
13
0.63%
FNS
13
0.63%
ANR
13
0.63%
SGD
11
0.53%
HCT
11
0.53%
RAS
11
0.53%
BBE
10
0.49%
CYP80B1
10
0.49%
8HGO
9
0.44%
CNMT
9
0.44%
LAC
9
0.44%
SQS/FDFT1
9
0.44%
COR
8
0.39%
GES
8
0.39%
DWF5
8
0.39%
AACT
8
0.39%
TPS
8
0.39%
GGPPS
7
0.34%
PMT
6
0.29%
TDC
6
0.29%
CPD/CYP90A1
6
0.29%
MPO
5
0.24%
CHI
5
0.24%
DFR
5
0.24%
CCR
5
0.24%
TAT
5
0.24%
ROT3/CYP90C1
5
0.24%
TYDC_DDC
4
0.19%
CYP719
4
0.19%
F5H/CYP84A
4
0.19%
CPR
4
0.19%
BR6OX1/CYP85A1
4
0.19%
MVK
4
0.19%
DXS
4
0.19%
HDR/IspH
4
0.19%
6OMT_4OMT_SOMT
3
0.15%
ISY
3
0.15%
CYP80F1
3
0.15%
FLS
3
0.15%
SMO1/SMO2
3
0.15%
CYP51G1
3
0.15%
SQE
3
0.15%
IDI
3
0.15%
HDS/IspG
3
0.15%
MVD
3
0.15%
ADC
2
0.1%
FK
2
0.1%
DET2
2
0.1%
CMK/IspE
2
0.1%
DXR
2
0.1%
MCT/IspD
2
0.1%
FPPS
2
0.1%
XMT_MXMT_DXMT
1
0.05%
ODC
1
0.05%
ANS/LDOX
1
0.05%
CCoAOMT
1
0.05%
HPPR
1
0.05%
HYD1
1
0.05%
CPI1
1
0.05%
DWF7
1
0.05%
DWF1
1
0.05%
MDS/IspF
1
0.05%
HMGS
1
0.05%
HMGR
1
0.05%
PMK
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 211 | 11 | POD (97) | View species results |
| Terpenoid pathway | 187 | 19 | BAHD (73) | View species results |
| Alkaloid pathway | 142 | 20 | NMT (33) | View species results |
| Flavonoid pathway | 105 | 10 | UFGT (27) | View species results |
| Rosmarinic acid pathway | 91 | 7 | C4H (33) | View species results |
| Steroid pathway | 48 | 12 | CAS (16) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 806 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 133 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Hsca1633570114160 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1634860117200 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1635130117830 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1635420118550 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1636820120780 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1636840120830 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1636850120850 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1636910120890 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1640470128870 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1640720129540 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1641110130180 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1641130130240 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1641130130260 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1642390134760 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1644320139380 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1644470139690 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1645690142610 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1646550145510 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1646550145530 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1647260147770 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1648190150580 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1649000153040 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1649280153940 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1651600162140 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1651600162320 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1654660173140 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1654730173410 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1655050174480 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1655330175280 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1655920178280 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1656010178530 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1656140178830 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1656640180890 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1657280183550 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1657780185030 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1657940185770 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1658400187330 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1658400187350 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1659540193990 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1659670194670 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1659670194680 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1659670194700 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1660340197400 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1660820199920 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1664090215550 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1664850219040 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1665250220940 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1665620222950 | Rosmarinic Acid | C4H | medium | pass |
| Hsca1730236830 | Rosmarinic Acid | C4H | low | borderline |
| Hsca1756240237920 | Rosmarinic Acid | C4H | low | borderline |