PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
Hlup002714F0565610.1 Alkaloid 7DLGT high pass
Hlup002742F0568830.1 Alkaloid 7DLGT medium pass
Hlup002751F0569870.1 Alkaloid 7DLGT medium pass
Hlup002766F0571440.1 Alkaloid 7DLGT low borderline
Hlup002766F0571470.1 Alkaloid 7DLGT medium pass
Hlup002766F0571480.1 Alkaloid 7DLGT low borderline
Hlup002853F0580230.1 Alkaloid 7DLGT low borderline
Hlup002864F0581420.1 Alkaloid 7DLGT medium pass
Hlup002901F0586310.1 Alkaloid 7DLGT low borderline
Hlup002923F0588370.1 Alkaloid 7DLGT low borderline
Hlup002925F0589010.1 Alkaloid 7DLGT low borderline
Hlup002925F0589020.1 Alkaloid 7DLGT medium pass
Hlup002925F0589030.1 Alkaloid 7DLGT medium pass
Hlup003038F0600650.1 Alkaloid 7DLGT medium pass
Hlup003157F0612620.1 Alkaloid 7DLGT high pass
Hlup003184F0615620.1 Alkaloid 7DLGT low borderline
Hlup003184F0615630.1 Alkaloid 7DLGT low borderline
Hlup003251F0621650.1 Alkaloid 7DLGT high pass
Hlup003253F0622090.1 Alkaloid 7DLGT medium pass
Hlup003253F0622100.1 Alkaloid 7DLGT medium pass
Hlup003253F0622130.1 Alkaloid 7DLGT medium pass
Hlup003253F0622190.1 Alkaloid 7DLGT high pass
Hlup003253F0622200.1 Alkaloid 7DLGT high pass
Hlup003303F0626720.1 Alkaloid 7DLGT high pass
Hlup003306F0626880.1 Alkaloid 7DLGT low borderline
Hlup003306F0626890.1 Alkaloid 7DLGT low borderline
Hlup003309F0627180.1 Alkaloid 7DLGT low borderline
Hlup003335F0630440.1 Alkaloid 7DLGT medium pass
Hlup003628F0654960.1 Alkaloid 7DLGT low borderline
Hlup003651F0656660.1 Alkaloid 7DLGT high pass
Hlup003651F0656690.1 Alkaloid 7DLGT high pass
Hlup003683F0659590.1 Alkaloid 7DLGT low borderline
Hlup003724F0663650.1 Alkaloid 7DLGT low borderline
Hlup003764F0666280.1 Alkaloid 7DLGT low borderline
Hlup003764F0666300.1 Alkaloid 7DLGT low borderline
Hlup003764F0666320.1 Alkaloid 7DLGT low borderline
Hlup003764F0666330.1 Alkaloid 7DLGT low borderline
Hlup003841F0671930.1 Alkaloid 7DLGT medium pass
Hlup003841F0671940.1 Alkaloid 7DLGT medium pass
Hlup003906F0676590.1 Alkaloid 7DLGT low borderline
Hlup003906F0676610.1 Alkaloid 7DLGT low borderline
Hlup003906F0676650.1 Alkaloid 7DLGT low borderline
Hlup003997F0683660.1 Alkaloid 7DLGT medium pass
Hlup004040F0687310.1 Alkaloid 7DLGT low borderline
Hlup004040F0687320.1 Alkaloid 7DLGT low borderline
Hlup004041F0687440.1 Alkaloid 7DLGT medium pass
Hlup004120F0693340.1 Alkaloid 7DLGT low borderline
Hlup004120F0693370.1 Alkaloid 7DLGT medium pass
Hlup004120F0693390.1 Alkaloid 7DLGT low borderline
Hlup004120F0693400.1 Alkaloid 7DLGT medium pass