PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
Reset
Gene Pathway Family Confidence Status
Hlup000017F0017660.1 Alkaloid PMT low borderline
Hlup000154F0084240.1 Alkaloid PMT medium pass
Hlup000238F0117510.1 Alkaloid PMT low borderline
Hlup000469F0186000.1 Alkaloid PMT medium pass
Hlup000659F0235820.1 Alkaloid PMT low borderline
Hlup000800F0267420.1 Alkaloid PMT low borderline
Hlup000800F0267450.1 Alkaloid PMT medium pass
Hlup000843F0277290.1 Alkaloid PMT medium pass
Hlup000866F0281600.1 Alkaloid PMT low borderline
Hlup000952F0298830.1 Alkaloid PMT low borderline
Hlup001040F0317960.1 Alkaloid PMT low borderline
Hlup001040F0317980.1 Alkaloid PMT low borderline
Hlup001094F0327920.1 Alkaloid PMT low borderline
Hlup001105F0330360.1 Alkaloid PMT low borderline
Hlup001341F0376260.1 Alkaloid PMT low borderline
Hlup001470F0399920.1 Alkaloid PMT low borderline
Hlup001470F0399930.1 Alkaloid PMT medium pass
Hlup001470F0399940.1 Alkaloid PMT low borderline
Hlup001591F0419810.1 Alkaloid PMT low borderline
Hlup002012F0478820.1 Alkaloid PMT medium pass
Hlup002012F0478830.1 Alkaloid PMT medium pass
Hlup002012F0478840.1 Alkaloid PMT medium pass
Hlup002012F0478850.1 Alkaloid PMT low borderline
Hlup002231F0508670.1 Alkaloid PMT medium borderline
Hlup002879F0583520.1 Alkaloid PMT low borderline
Hlup002985F0595350.1 Alkaloid PMT medium pass
Hlup003013F0598390.1 Alkaloid PMT medium borderline
Hlup003254F0622260.1 Alkaloid PMT medium pass
Hlup003333F0630130.1 Alkaloid PMT low borderline
Hlup003454F0640200.1 Alkaloid PMT low borderline
Hlup003685F0659710.1 Alkaloid PMT low borderline
Hlup003685F0659720.1 Alkaloid PMT low borderline
Hlup003685F0659730.1 Alkaloid PMT low borderline
Hlup003988F0682910.1 Alkaloid PMT medium pass
Hlup004053F0688360.1 Alkaloid PMT medium pass
Hlup004168F0697020.1 Alkaloid PMT low borderline
Hlup004440F0717290.1 Alkaloid PMT medium borderline
Hlup004790F0741040.1 Alkaloid PMT low borderline
Hlup004818F0743490.1 Alkaloid PMT low borderline
Hlup005050F0759240.1 Alkaloid PMT low borderline
Hlup005510F0783380.1 Alkaloid PMT medium pass
Hlup005535F0784690.1 Alkaloid PMT low borderline
Hlup005535F0784720.1 Alkaloid PMT low borderline
Hlup005535F0784730.1 Alkaloid PMT low borderline
Hlup005586F0787380.1 Alkaloid PMT medium pass
Hlup005614F0788860.1 Alkaloid PMT low borderline
Hlup007159F0847790.1 Alkaloid PMT low borderline
Hlup007264F0851200.1 Alkaloid PMT medium borderline
Hlup007512F0858500.1 Alkaloid PMT medium pass
Hlup008803F0885490.1 Alkaloid PMT low borderline