PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TYDC_DDC
Reset
Gene Pathway Family Confidence Status Best Target
Hlup000073F0049630.1 Alkaloid TYDC_DDC low borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
Hlup000105F0064970.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup000129F0075020.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup000129F0075100.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup000326F0146270.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup000326F0146280.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup000763F0258990.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup000830F0273960.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup000922F0293170.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001014F0312930.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001014F0312940.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
Hlup001014F0312980.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001014F0312990.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
Hlup001014F0313010.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
Hlup001162F0342590.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup001462F0398470.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001477F0401110.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413190.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413220.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413230.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413260.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413320.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413340.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413380.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413400.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413430.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001553F0413460.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup001647F0428170.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup001647F0428370.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup002139F0496020.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup002139F0496060.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup002139F0496130.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup002139F0496150.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup002139F0496170.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup002707F0564720.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup005076F0760140.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup005442F0780210.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup005442F0780220.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hlup005576F0786820.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup005576F0786850.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup005576F0786880.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup006484F0825390.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup006484F0825400.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup006484F0825420.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
Hlup007869F0867020.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hlup007874F0867170.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO