PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Hlup000003F0005270.1 Flavonoid IFR low borderline
Hlup000018F0018480.1 Flavonoid IFR low borderline
Hlup000048F0037500.1 Flavonoid IFR medium borderline
Hlup000094F0059680.1 Flavonoid IFR medium pass
Hlup000109F0066330.1 Flavonoid IFR high pass
Hlup000228F0114030.1 Flavonoid IFR high pass
Hlup000331F0147750.1 Flavonoid IFR low borderline
Hlup000360F0155180.1 Flavonoid IFR high pass
Hlup000363F0156160.1 Flavonoid IFR high pass
Hlup000405F0168840.1 Flavonoid IFR low borderline
Hlup000478F0188110.1 Flavonoid IFR low borderline
Hlup000666F0237390.1 Flavonoid IFR low borderline
Hlup001037F0317470.1 Flavonoid IFR low borderline
Hlup001152F0340140.1 Flavonoid IFR low borderline
Hlup001395F0386670.1 Flavonoid IFR low borderline
Hlup001493F0403690.1 Flavonoid IFR high pass
Hlup001501F0405030.1 Flavonoid IFR low borderline
Hlup001519F0407760.1 Flavonoid IFR low borderline
Hlup001524F0409210.1 Flavonoid IFR medium pass
Hlup001744F0443720.1 Flavonoid IFR high pass
Hlup001955F0471010.1 Flavonoid IFR high pass
Hlup002335F0521510.1 Flavonoid IFR low borderline
Hlup002778F0572980.1 Flavonoid IFR low borderline
Hlup002843F0579020.1 Flavonoid IFR low borderline
Hlup003205F0617650.1 Flavonoid IFR low borderline
Hlup003808F0669160.1 Flavonoid IFR high pass
Hlup004696F0735240.1 Flavonoid IFR high pass
Hlup004847F0745480.1 Flavonoid IFR high pass
Hlup004957F0753100.1 Flavonoid IFR low borderline
Hlup005244F0769070.1 Flavonoid IFR high pass
Hlup005326F0773860.1 Flavonoid IFR low borderline
Hlup005827F0798520.1 Flavonoid IFR high pass
Hlup006184F0813130.1 Flavonoid IFR low borderline
Hlup006346F0819820.1 Flavonoid IFR high pass
Hlup006484F0825470.1 Flavonoid IFR low borderline
Hlup006988F0842740.1 Flavonoid IFR high pass
Hlup008309F0876290.1 Flavonoid IFR high pass