PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
Hlup000027F0025410.1 Alkaloid TRI/TRII medium pass
Hlup000042F0034670.1 Alkaloid TRI/TRII medium pass
Hlup000101F0063410.1 Alkaloid TRI/TRII medium pass
Hlup000101F0063440.1 Alkaloid TRI/TRII medium pass
Hlup000119F0070720.1 Alkaloid TRI/TRII medium pass
Hlup000119F0070740.1 Alkaloid TRI/TRII medium pass
Hlup000119F0070790.1 Alkaloid TRI/TRII medium pass
Hlup000119F0070820.1 Alkaloid TRI/TRII medium pass
Hlup000185F0097260.1 Alkaloid TRI/TRII medium pass
Hlup000198F0103080.1 Alkaloid TRI/TRII low borderline
Hlup000282F0132170.1 Alkaloid TRI/TRII low borderline
Hlup000297F0136190.1 Alkaloid TRI/TRII low borderline
Hlup000304F0138920.1 Alkaloid TRI/TRII medium pass
Hlup000403F0168170.1 Alkaloid TRI/TRII medium pass
Hlup000623F0225660.1 Alkaloid TRI/TRII medium pass
Hlup000740F0253610.1 Alkaloid TRI/TRII low borderline
Hlup000740F0253620.1 Alkaloid TRI/TRII low borderline
Hlup000799F0266820.1 Alkaloid TRI/TRII low borderline
Hlup000871F0282780.1 Alkaloid TRI/TRII medium pass
Hlup000871F0282880.1 Alkaloid TRI/TRII medium pass
Hlup000917F0292210.1 Alkaloid TRI/TRII low borderline
Hlup000917F0292220.1 Alkaloid TRI/TRII low borderline
Hlup000960F0299870.1 Alkaloid TRI/TRII medium pass
Hlup000960F0299880.1 Alkaloid TRI/TRII medium pass
Hlup000960F0299900.1 Alkaloid TRI/TRII medium pass
Hlup000960F0299910.1 Alkaloid TRI/TRII medium pass
Hlup001085F0326510.1 Alkaloid TRI/TRII medium pass
Hlup001175F0345200.1 Alkaloid TRI/TRII medium pass
Hlup001211F0352060.1 Alkaloid TRI/TRII low borderline
Hlup001354F0378860.1 Alkaloid TRI/TRII medium pass
Hlup001648F0428570.1 Alkaloid TRI/TRII medium pass
Hlup001760F0445370.1 Alkaloid TRI/TRII medium pass
Hlup001760F0445430.1 Alkaloid TRI/TRII medium pass
Hlup001760F0445440.1 Alkaloid TRI/TRII medium pass
Hlup001770F0447220.1 Alkaloid TRI/TRII medium pass
Hlup001799F0451460.1 Alkaloid TRI/TRII medium pass
Hlup002020F0480390.1 Alkaloid TRI/TRII medium pass
Hlup002041F0483210.1 Alkaloid TRI/TRII low borderline
Hlup002041F0483250.1 Alkaloid TRI/TRII low borderline
Hlup002044F0483890.1 Alkaloid TRI/TRII low borderline
Hlup002044F0483950.1 Alkaloid TRI/TRII medium pass
Hlup002371F0525430.1 Alkaloid TRI/TRII medium pass
Hlup002743F0568980.1 Alkaloid TRI/TRII medium pass
Hlup003620F0654220.1 Alkaloid TRI/TRII low borderline
Hlup003652F0656740.1 Alkaloid TRI/TRII low borderline
Hlup003755F0665660.1 Alkaloid TRI/TRII medium pass
Hlup004136F0694910.1 Alkaloid TRI/TRII medium pass
Hlup004158F0696210.1 Alkaloid TRI/TRII medium pass
Hlup004158F0696240.1 Alkaloid TRI/TRII medium pass
Hlup004158F0696270.1 Alkaloid TRI/TRII medium pass