PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Hlup000012F0014320.1 Alkaloid PYKS low borderline
Hlup000044F0035840.1 Alkaloid PYKS low borderline
Hlup000179F0094890.1 Alkaloid PYKS low borderline
Hlup000199F0103550.1 Alkaloid PYKS low borderline
Hlup000203F0105190.1 Alkaloid PYKS medium pass
Hlup000203F0105210.1 Alkaloid PYKS high pass
Hlup000231F0114880.1 Alkaloid PYKS low borderline
Hlup000254F0123820.1 Alkaloid PYKS low borderline
Hlup000257F0124820.1 Alkaloid PYKS low borderline
Hlup000463F0184220.1 Alkaloid PYKS low borderline
Hlup000526F0200980.1 Alkaloid PYKS low borderline
Hlup000539F0203960.1 Alkaloid PYKS low borderline
Hlup000707F0246290.1 Alkaloid PYKS low borderline
Hlup000948F0298070.1 Alkaloid PYKS low borderline
Hlup001327F0373010.1 Alkaloid PYKS low borderline
Hlup001329F0374120.1 Alkaloid PYKS high pass
Hlup001329F0374130.1 Alkaloid PYKS high pass
Hlup001329F0374140.1 Alkaloid PYKS high pass
Hlup001329F0374160.1 Alkaloid PYKS high pass
Hlup001329F0374170.1 Alkaloid PYKS high pass
Hlup001432F0393010.1 Alkaloid PYKS low borderline
Hlup001483F0402100.1 Alkaloid PYKS low borderline
Hlup001764F0445790.1 Alkaloid PYKS low borderline
Hlup001790F0450370.1 Alkaloid PYKS low borderline
Hlup001847F0457690.1 Alkaloid PYKS low borderline
Hlup001914F0465720.1 Alkaloid PYKS low borderline
Hlup002037F0482690.1 Alkaloid PYKS low borderline
Hlup002230F0508580.1 Alkaloid PYKS medium pass
Hlup002397F0528760.1 Alkaloid PYKS high pass
Hlup002397F0528770.1 Alkaloid PYKS high pass
Hlup002397F0528790.1 Alkaloid PYKS high pass
Hlup002519F0542740.1 Alkaloid PYKS low borderline
Hlup003896F0675980.1 Alkaloid PYKS high pass
Hlup003896F0676030.1 Alkaloid PYKS high pass
Hlup004136F0694660.1 Alkaloid PYKS high pass
Hlup004136F0694670.1 Alkaloid PYKS medium pass
Hlup004232F0701250.1 Alkaloid PYKS low borderline
Hlup004395F0712950.1 Alkaloid PYKS medium pass
Hlup004810F0742940.1 Alkaloid PYKS low borderline
Hlup005489F0782550.1 Alkaloid PYKS low borderline
Hlup006415F0822810.1 Alkaloid PYKS low borderline
Hlup006415F0822820.1 Alkaloid PYKS low borderline
Hlup008642F0882490.1 Alkaloid PYKS high pass
Hlup009245F0892090.1 Alkaloid PYKS low borderline
Hlup010684F0906570.1 Alkaloid PYKS low borderline
Hlup010809F0907510.1 Alkaloid PYKS high pass