PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Hlup000004F0006820.1 Alkaloid GS low borderline
Hlup000004F0006830.1 Alkaloid GS low borderline
Hlup000004F0006840.1 Alkaloid GS low borderline
Hlup000090F0058060.1 Alkaloid GS low borderline
Hlup000367F0157160.1 Alkaloid GS medium pass
Hlup000367F0157210.1 Alkaloid GS medium pass
Hlup000645F0232070.1 Alkaloid GS medium pass
Hlup000645F0232090.1 Alkaloid GS medium pass
Hlup001005F0310340.1 Alkaloid GS high pass
Hlup001005F0310360.1 Alkaloid GS high pass
Hlup001005F0310390.1 Alkaloid GS high pass
Hlup001122F0334350.1 Alkaloid GS low borderline
Hlup001211F0352140.1 Alkaloid GS high pass
Hlup001218F0353300.1 Alkaloid GS low borderline
Hlup001227F0355120.1 Alkaloid GS low borderline
Hlup001681F0433770.1 Alkaloid GS high pass
Hlup001681F0433810.1 Alkaloid GS high pass
Hlup001986F0475560.1 Alkaloid GS low borderline
Hlup001989F0476030.1 Alkaloid GS high pass
Hlup001989F0476060.1 Alkaloid GS high pass
Hlup002237F0509420.1 Alkaloid GS low borderline
Hlup002246F0510390.1 Alkaloid GS low borderline
Hlup002246F0510400.1 Alkaloid GS low borderline
Hlup002369F0525030.1 Alkaloid GS low borderline
Hlup002628F0555900.1 Alkaloid GS low borderline
Hlup002923F0588400.1 Alkaloid GS low borderline
Hlup002923F0588410.1 Alkaloid GS low borderline
Hlup002923F0588440.1 Alkaloid GS low borderline
Hlup002923F0588450.1 Alkaloid GS low borderline
Hlup002982F0595000.1 Alkaloid GS low borderline
Hlup002982F0595010.1 Alkaloid GS high pass
Hlup003138F0611380.1 Alkaloid GS medium pass
Hlup003138F0611410.1 Alkaloid GS high pass
Hlup003188F0616320.1 Alkaloid GS high pass
Hlup004011F0684590.1 Alkaloid GS high pass
Hlup004011F0684620.1 Alkaloid GS high pass
Hlup004416F0714840.1 Alkaloid GS high pass
Hlup004493F0720890.1 Alkaloid GS low borderline
Hlup004867F0747320.1 Alkaloid GS high pass
Hlup005013F0756980.1 Alkaloid GS low borderline
Hlup005237F0768480.1 Alkaloid GS medium pass
Hlup005331F0774370.1 Alkaloid GS low borderline
Hlup006648F0831500.1 Alkaloid GS medium pass
Hlup006648F0831510.1 Alkaloid GS medium pass
Hlup008542F0880540.1 Alkaloid GS low borderline
Hlup008542F0880550.1 Alkaloid GS low borderline
Hlup008914F0887310.1 Alkaloid GS high pass
Hlup008914F0887320.1 Alkaloid GS high pass