PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TDC
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Gene Pathway Family Confidence Status
Hlup000125F0073080.1 Alkaloid TDC low borderline
Hlup000129F0075110.1 Alkaloid TDC medium borderline
Hlup000143F0080250.1 Alkaloid TDC low borderline
Hlup000277F0130520.1 Alkaloid TDC low borderline
Hlup000326F0146290.1 Alkaloid TDC medium borderline
Hlup000360F0155000.1 Alkaloid TDC low borderline
Hlup000424F0174260.1 Alkaloid TDC medium borderline
Hlup000775F0261440.1 Alkaloid TDC low borderline
Hlup000887F0286170.1 Alkaloid TDC low borderline
Hlup000952F0298880.1 Alkaloid TDC medium borderline
Hlup001003F0309950.1 Alkaloid TDC low borderline
Hlup001014F0313030.1 Alkaloid TDC low borderline
Hlup001342F0376460.1 Alkaloid TDC low borderline
Hlup001449F0396350.1 Alkaloid TDC low borderline
Hlup001597F0420750.1 Alkaloid TDC low borderline
Hlup001889F0462660.1 Alkaloid TDC medium borderline
Hlup001897F0463880.1 Alkaloid TDC medium borderline
Hlup001993F0476490.1 Alkaloid TDC low borderline
Hlup002465F0536790.1 Alkaloid TDC medium borderline
Hlup002817F0576210.1 Alkaloid TDC low borderline
Hlup002936F0590010.1 Alkaloid TDC medium borderline
Hlup003246F0621000.1 Alkaloid TDC low borderline
Hlup004049F0687820.1 Alkaloid TDC low borderline
Hlup006484F0825410.1 Alkaloid TDC medium borderline
Hlup006484F0825440.1 Alkaloid TDC medium borderline
Hlup006486F0825590.1 Alkaloid TDC medium borderline
Hlup009312F0892990.1 Alkaloid TDC low borderline