PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Hlup000000F0001400.1 Alkaloid T3O medium pass
Hlup000007F0009940.1 Alkaloid T3O medium pass
Hlup000026F0024820.1 Alkaloid T3O medium borderline
Hlup000026F0025010.1 Alkaloid T3O medium borderline
Hlup000044F0036130.1 Alkaloid T3O medium borderline
Hlup000102F0064130.1 Alkaloid T3O medium borderline
Hlup000187F0098100.1 Alkaloid T3O medium borderline
Hlup000227F0113850.1 Alkaloid T3O low borderline
Hlup000227F0113910.1 Alkaloid T3O medium borderline
Hlup000238F0117080.1 Alkaloid T3O medium borderline
Hlup000241F0119030.1 Alkaloid T3O medium borderline
Hlup000255F0124350.1 Alkaloid T3O medium pass
Hlup000323F0144610.1 Alkaloid T3O low borderline
Hlup000326F0145290.1 Alkaloid T3O medium pass
Hlup000326F0145300.1 Alkaloid T3O medium pass
Hlup000347F0151950.1 Alkaloid T3O medium borderline
Hlup000347F0152000.1 Alkaloid T3O medium borderline
Hlup000350F0152970.1 Alkaloid T3O medium borderline
Hlup000409F0169780.1 Alkaloid T3O medium borderline
Hlup000414F0171270.1 Alkaloid T3O low borderline
Hlup000422F0173760.1 Alkaloid T3O low borderline
Hlup000466F0184970.1 Alkaloid T3O low borderline
Hlup000487F0190890.1 Alkaloid T3O medium borderline
Hlup000487F0190940.1 Alkaloid T3O medium borderline
Hlup000490F0191730.1 Alkaloid T3O medium pass
Hlup000556F0208130.1 Alkaloid T3O medium borderline
Hlup000562F0209870.1 Alkaloid T3O medium borderline
Hlup000562F0210260.1 Alkaloid T3O medium pass
Hlup000575F0213770.1 Alkaloid T3O medium borderline
Hlup000575F0213790.1 Alkaloid T3O medium borderline
Hlup000595F0219240.1 Alkaloid T3O medium borderline
Hlup000600F0220280.1 Alkaloid T3O medium borderline
Hlup000603F0220980.1 Alkaloid T3O medium borderline
Hlup000603F0221110.1 Alkaloid T3O medium borderline
Hlup000623F0225380.1 Alkaloid T3O medium borderline
Hlup000623F0225550.1 Alkaloid T3O medium borderline
Hlup000629F0228080.1 Alkaloid T3O medium borderline
Hlup000667F0237480.1 Alkaloid T3O medium borderline
Hlup000667F0237520.1 Alkaloid T3O medium borderline
Hlup000667F0237730.1 Alkaloid T3O medium borderline
Hlup000667F0237740.1 Alkaloid T3O medium borderline
Hlup000667F0237760.1 Alkaloid T3O medium borderline
Hlup000667F0237770.1 Alkaloid T3O medium borderline
Hlup000667F0237780.1 Alkaloid T3O medium borderline
Hlup000667F0237790.1 Alkaloid T3O medium borderline
Hlup000667F0237800.1 Alkaloid T3O medium borderline
Hlup000667F0237840.1 Alkaloid T3O medium borderline
Hlup000667F0237850.1 Alkaloid T3O medium borderline
Hlup000667F0237890.1 Alkaloid T3O medium borderline
Hlup000667F0237900.1 Alkaloid T3O medium borderline