PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
Hlup003138F0611410.1 Phenylpropanoid CAD medium pass
Hlup003188F0616320.1 Phenylpropanoid CAD medium pass
Hlup003190F0616380.1 Phenylpropanoid CAD medium borderline
Hlup003279F0624740.1 Phenylpropanoid CAD low borderline
Hlup003520F0646350.1 Phenylpropanoid CAD low borderline
Hlup003572F0650000.1 Phenylpropanoid CAD low borderline
Hlup003663F0657870.1 Phenylpropanoid CAD low borderline
Hlup003722F0663420.1 Phenylpropanoid CAD medium pass
Hlup003722F0663440.1 Phenylpropanoid CAD medium pass
Hlup003722F0663460.1 Phenylpropanoid CAD medium pass
Hlup003722F0663470.1 Phenylpropanoid CAD medium pass
Hlup003722F0663480.1 Phenylpropanoid CAD low borderline
Hlup003744F0664970.1 Phenylpropanoid CAD medium borderline
Hlup003841F0671970.1 Phenylpropanoid CAD low borderline
Hlup004011F0684590.1 Phenylpropanoid CAD medium pass
Hlup004011F0684620.1 Phenylpropanoid CAD medium pass
Hlup004063F0689110.1 Phenylpropanoid CAD low borderline
Hlup004063F0689150.1 Phenylpropanoid CAD low borderline
Hlup004063F0689170.1 Phenylpropanoid CAD low borderline
Hlup004416F0714840.1 Phenylpropanoid CAD medium pass
Hlup004765F0739460.1 Phenylpropanoid CAD medium borderline
Hlup004867F0747320.1 Phenylpropanoid CAD medium pass
Hlup004957F0753100.1 Phenylpropanoid CAD low borderline
Hlup005331F0774370.1 Phenylpropanoid CAD low borderline
Hlup005464F0781320.1 Phenylpropanoid CAD medium borderline
Hlup005464F0781330.1 Phenylpropanoid CAD low borderline
Hlup005464F0781340.1 Phenylpropanoid CAD medium borderline
Hlup005464F0781360.1 Phenylpropanoid CAD medium borderline
Hlup005464F0781370.1 Phenylpropanoid CAD medium borderline
Hlup005464F0781440.1 Phenylpropanoid CAD medium borderline
Hlup005464F0781460.1 Phenylpropanoid CAD medium borderline
Hlup005513F0783620.1 Phenylpropanoid CAD medium borderline
Hlup005513F0783630.1 Phenylpropanoid CAD medium borderline
Hlup005513F0783660.1 Phenylpropanoid CAD medium borderline
Hlup006556F0828310.1 Phenylpropanoid CAD low borderline
Hlup006556F0828330.1 Phenylpropanoid CAD low borderline
Hlup006648F0831500.1 Phenylpropanoid CAD low borderline
Hlup006648F0831510.1 Phenylpropanoid CAD low borderline
Hlup007355F0854020.1 Phenylpropanoid CAD medium pass
Hlup008542F0880550.1 Phenylpropanoid CAD low borderline
Hlup008914F0887310.1 Phenylpropanoid CAD medium pass
Hlup008914F0887320.1 Phenylpropanoid CAD medium pass
Hlup009351F0893490.1 Phenylpropanoid CAD low borderline
Hlup009351F0893500.1 Phenylpropanoid CAD low borderline
Hlup009351F0893530.1 Phenylpropanoid CAD low borderline
Hlup010598F0905620.1 Phenylpropanoid CAD medium pass
Hlup011415F0910870.1 Phenylpropanoid CAD medium borderline
Hlup011887F0912360.1 Phenylpropanoid CAD low borderline