PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Hlup002326F0519840.1 Alkaloid H6H medium borderline
Hlup002355F0523410.1 Alkaloid H6H medium borderline
Hlup002355F0523420.1 Alkaloid H6H medium borderline
Hlup002355F0523430.1 Alkaloid H6H medium borderline
Hlup002355F0523470.1 Alkaloid H6H medium borderline
Hlup002355F0523500.1 Alkaloid H6H medium borderline
Hlup002355F0523510.1 Alkaloid H6H medium borderline
Hlup002355F0523580.1 Alkaloid H6H low borderline
Hlup002424F0532010.1 Alkaloid H6H low borderline
Hlup002430F0533110.1 Alkaloid H6H medium borderline
Hlup002670F0560530.1 Alkaloid H6H medium borderline
Hlup002827F0576840.1 Alkaloid H6H high pass
Hlup002827F0576900.1 Alkaloid H6H medium borderline
Hlup002827F0576910.1 Alkaloid H6H medium borderline
Hlup002827F0576970.1 Alkaloid H6H medium borderline
Hlup002827F0576990.1 Alkaloid H6H high pass
Hlup002827F0577000.1 Alkaloid H6H medium borderline
Hlup002827F0577020.1 Alkaloid H6H low borderline
Hlup002942F0590690.1 Alkaloid H6H low borderline
Hlup002942F0590700.1 Alkaloid H6H low borderline
Hlup003168F0614170.1 Alkaloid H6H low borderline
Hlup003255F0622430.1 Alkaloid H6H low borderline
Hlup003321F0628740.1 Alkaloid H6H low borderline
Hlup003321F0628750.1 Alkaloid H6H low borderline
Hlup003335F0630350.1 Alkaloid H6H low borderline
Hlup003514F0645790.1 Alkaloid H6H high pass
Hlup003701F0661410.1 Alkaloid H6H low borderline
Hlup003701F0661420.1 Alkaloid H6H low borderline
Hlup003701F0661460.1 Alkaloid H6H low borderline
Hlup003701F0661480.1 Alkaloid H6H low borderline
Hlup003918F0677710.1 Alkaloid H6H low borderline
Hlup003929F0678340.1 Alkaloid H6H medium borderline
Hlup003942F0679570.1 Alkaloid H6H medium borderline
Hlup003977F0681890.1 Alkaloid H6H low borderline
Hlup003977F0681920.1 Alkaloid H6H low borderline
Hlup003977F0681950.1 Alkaloid H6H low borderline
Hlup003977F0681960.1 Alkaloid H6H low borderline
Hlup004837F0744790.1 Alkaloid H6H low borderline
Hlup005043F0758550.1 Alkaloid H6H low borderline
Hlup005158F0763560.1 Alkaloid H6H low borderline
Hlup005158F0763590.1 Alkaloid H6H low borderline
Hlup005364F0776080.1 Alkaloid H6H high pass
Hlup005495F0782810.1 Alkaloid H6H low borderline
Hlup005737F0794260.1 Alkaloid H6H medium borderline
Hlup006613F0830220.1 Alkaloid H6H medium borderline
Hlup006950F0841240.1 Alkaloid H6H low borderline
Hlup006950F0841250.1 Alkaloid H6H medium pass
Hlup006950F0841260.1 Alkaloid H6H low borderline
Hlup007021F0843680.1 Alkaloid H6H low borderline
Hlup007293F0852170.1 Alkaloid H6H medium borderline