PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Hlup004812F0743070.1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Hlup004851F0745690.1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Hlup004920F0750310.1 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Hlup004934F0751440.1 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
Hlup004957F0753200.1 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
Hlup004967F0753790.1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Hlup005089F0760830.1 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
Hlup005441F0779970.1 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Hlup005441F0779980.1 Alkaloid NMT low borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Hlup005479F0782160.1 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Hlup005868F0800600.1 Alkaloid NMT medium borderline NMT__00043__sp_Q8H0D2_DXMT1_COFAR
Hlup005868F0800650.1 Alkaloid NMT medium borderline NMT__00010__sp_A4GE70_DXMT1_COFCA
Hlup005966F0803960.1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Hlup005966F0803980.1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Hlup006549F0827980.1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Hlup006668F0832540.1 Alkaloid NMT low borderline NMT__00041__sp_Q8GWT4_ANM15_ARATH
Hlup006821F0837550.1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Hlup007102F0845720.1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Hlup007178F0848330.1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Hlup007179F0848360.1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Hlup007525F0858840.1 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
Hlup007580F0860010.1 Alkaloid NMT low borderline NMT__00069__sp_Q9ZSM8_EZA1_ARATH
Hlup007749F0864150.1 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
Hlup008066F0871320.1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
Hlup008604F0881740.1 Alkaloid NMT low borderline NMT__00042__sp_Q8GZB6_SUVH4_ARATH
Hlup008901F0887110.1 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
Hlup010355F0903890.1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
Hlup010750F0907120.1 Alkaloid NMT low borderline NMT__00069__sp_Q9ZSM8_EZA1_ARATH