PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Hlup000667F0237910.1 Alkaloid T3O medium borderline
Hlup000682F0240880.1 Alkaloid T3O medium borderline
Hlup000860F0280810.1 Alkaloid T3O medium borderline
Hlup000860F0280830.1 Alkaloid T3O medium borderline
Hlup000860F0280850.1 Alkaloid T3O medium borderline
Hlup000924F0293560.1 Alkaloid T3O medium pass
Hlup000924F0293570.1 Alkaloid T3O medium pass
Hlup000985F0306170.1 Alkaloid T3O medium pass
Hlup001004F0310040.1 Alkaloid T3O medium borderline
Hlup001004F0310050.1 Alkaloid T3O medium borderline
Hlup001004F0310090.1 Alkaloid T3O medium borderline
Hlup001045F0319040.1 Alkaloid T3O medium borderline
Hlup001140F0338210.1 Alkaloid T3O medium borderline
Hlup001140F0338220.1 Alkaloid T3O medium borderline
Hlup001201F0350080.1 Alkaloid T3O medium pass
Hlup001313F0370290.1 Alkaloid T3O medium borderline
Hlup001313F0370390.1 Alkaloid T3O medium borderline
Hlup001316F0370760.1 Alkaloid T3O medium pass
Hlup001395F0386490.1 Alkaloid T3O high pass
Hlup001488F0402660.1 Alkaloid T3O medium borderline
Hlup001533F0410240.1 Alkaloid T3O high pass
Hlup001557F0414160.1 Alkaloid T3O medium pass
Hlup001589F0419320.1 Alkaloid T3O medium borderline
Hlup001589F0419350.1 Alkaloid T3O medium borderline
Hlup001641F0426620.1 Alkaloid T3O medium borderline
Hlup001641F0426650.1 Alkaloid T3O medium borderline
Hlup001641F0426670.1 Alkaloid T3O medium borderline
Hlup001641F0426700.1 Alkaloid T3O medium borderline
Hlup001641F0426720.1 Alkaloid T3O medium borderline
Hlup001641F0426730.1 Alkaloid T3O medium borderline
Hlup001641F0426800.1 Alkaloid T3O medium borderline
Hlup001680F0433730.1 Alkaloid T3O low borderline
Hlup001689F0435220.1 Alkaloid T3O low borderline
Hlup001775F0448260.1 Alkaloid T3O medium pass
Hlup001932F0467910.1 Alkaloid T3O medium borderline
Hlup001971F0473700.1 Alkaloid T3O low borderline
Hlup002008F0478320.1 Alkaloid T3O medium pass
Hlup002041F0483450.1 Alkaloid T3O medium borderline
Hlup002119F0493820.1 Alkaloid T3O medium pass
Hlup002123F0494320.1 Alkaloid T3O medium borderline
Hlup002134F0495610.1 Alkaloid T3O medium pass
Hlup002250F0511120.1 Alkaloid T3O medium borderline
Hlup002253F0511280.1 Alkaloid T3O low borderline
Hlup002297F0516580.1 Alkaloid T3O medium borderline
Hlup002297F0516640.1 Alkaloid T3O medium borderline
Hlup002297F0516650.1 Alkaloid T3O medium borderline
Hlup002297F0516660.1 Alkaloid T3O medium borderline
Hlup002297F0516700.1 Alkaloid T3O medium borderline
Hlup002306F0517700.1 Alkaloid T3O medium borderline
Hlup002306F0517720.1 Alkaloid T3O medium borderline