PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3816
Candidate Protein Records
3048
Pathway-Level Records
7727
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Hlup006859F0838730.1 Terpenoid DXR low borderline
Hlup007147F0847360.1 Terpenoid DXR high pass
Hlup007400F0855660.1 Terpenoid DXR low borderline
Hlup008745F0884510.1 Terpenoid DXR low borderline
Hlup000003F0005420.1 Terpenoid DXS medium pass
Hlup000442F0179330.1 Terpenoid DXS medium pass
Hlup002303F0517370.1 Terpenoid DXS medium pass
Hlup008968F0888100.1 Terpenoid DXS medium pass
Hlup000122F0072140.1 Terpenoid FPPS medium pass
Hlup000528F0201370.1 Terpenoid FPPS medium pass
Hlup000817F0270730.1 Terpenoid FPPS medium pass
Hlup002454F0535580.1 Terpenoid FPPS medium borderline
Hlup002655F0558480.1 Terpenoid FPPS low borderline
Hlup002655F0558490.1 Terpenoid FPPS low borderline
Hlup003102F0607670.1 Terpenoid FPPS medium pass
Hlup006700F0833720.1 Terpenoid FPPS low borderline
Hlup006700F0833730.1 Terpenoid FPPS low borderline
Hlup006700F0833740.1 Terpenoid FPPS low borderline
Hlup000601F0220730.1 Terpenoid GGPPS medium borderline
Hlup001483F0401930.1 Terpenoid GGPPS low borderline
Hlup001483F0401960.1 Terpenoid GGPPS low borderline
Hlup001772F0447560.1 Terpenoid GGPPS medium borderline
Hlup002790F0574230.1 Terpenoid GGPPS medium borderline
Hlup004618F0729900.1 Terpenoid GGPPS medium borderline
Hlup006148F0811420.1 Terpenoid GGPPS medium borderline
Hlup009123F0890500.1 Terpenoid GGPPS medium borderline
Hlup000117F0070170.1 Terpenoid GPPS low borderline
Hlup000601F0220750.1 Terpenoid GPPS low borderline
Hlup001962F0472330.1 Terpenoid HDR/IspH high pass
Hlup002966F0593360.1 Terpenoid HDS/IspG high pass
Hlup000047F0037240.1 Terpenoid HMGR low borderline
Hlup000064F0045270.1 Terpenoid HMGR medium pass
Hlup000067F0046260.1 Terpenoid HMGR medium pass
Hlup000067F0046270.1 Terpenoid HMGR medium pass
Hlup000074F0050170.1 Terpenoid HMGR low borderline
Hlup000079F0053420.1 Terpenoid HMGR medium borderline
Hlup000298F0136690.1 Terpenoid HMGR low borderline
Hlup000301F0137800.1 Terpenoid HMGR medium pass
Hlup000301F0137810.1 Terpenoid HMGR low borderline
Hlup000361F0155560.1 Terpenoid HMGR low borderline
Hlup000379F0160190.1 Terpenoid HMGR medium pass
Hlup000468F0185810.1 Terpenoid HMGR medium pass
Hlup000468F0185820.1 Terpenoid HMGR low borderline
Hlup000619F0224660.1 Terpenoid HMGR medium pass
Hlup000750F0256320.1 Terpenoid HMGR low borderline
Hlup000765F0259490.1 Terpenoid HMGR medium pass
Hlup000844F0277390.1 Terpenoid HMGR medium pass
Hlup000922F0293300.1 Terpenoid HMGR low borderline
Hlup000997F0308550.1 Terpenoid HMGR low borderline
Hlup001004F0310130.1 Terpenoid HMGR medium pass