PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3816
Candidate Protein Records
3048
Pathway-Level Records
7727
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Hlup007179F0848360.1 Alkaloid NMT low borderline
Hlup007525F0858840.1 Alkaloid NMT medium pass
Hlup007580F0860010.1 Alkaloid NMT low borderline
Hlup007749F0864150.1 Alkaloid NMT medium pass
Hlup008066F0871320.1 Alkaloid NMT medium pass
Hlup008604F0881740.1 Alkaloid NMT low borderline
Hlup008901F0887110.1 Alkaloid NMT low borderline
Hlup010355F0903890.1 Alkaloid NMT medium pass
Hlup010750F0907120.1 Alkaloid NMT low borderline
Hlup003323F0629060.1 Alkaloid ODC medium pass
Hlup004298F0705850.1 Alkaloid ODC medium pass
Hlup000017F0017660.1 Alkaloid PMT low borderline
Hlup000154F0084240.1 Alkaloid PMT medium pass
Hlup000238F0117510.1 Alkaloid PMT low borderline
Hlup000469F0186000.1 Alkaloid PMT medium pass
Hlup000659F0235820.1 Alkaloid PMT low borderline
Hlup000800F0267420.1 Alkaloid PMT low borderline
Hlup000800F0267450.1 Alkaloid PMT medium pass
Hlup000843F0277290.1 Alkaloid PMT medium pass
Hlup000866F0281600.1 Alkaloid PMT low borderline
Hlup000952F0298830.1 Alkaloid PMT low borderline
Hlup001040F0317960.1 Alkaloid PMT low borderline
Hlup001040F0317980.1 Alkaloid PMT low borderline
Hlup001094F0327920.1 Alkaloid PMT low borderline
Hlup001105F0330360.1 Alkaloid PMT low borderline
Hlup001341F0376260.1 Alkaloid PMT low borderline
Hlup001470F0399920.1 Alkaloid PMT low borderline
Hlup001470F0399930.1 Alkaloid PMT medium pass
Hlup001470F0399940.1 Alkaloid PMT low borderline
Hlup001591F0419810.1 Alkaloid PMT low borderline
Hlup002012F0478820.1 Alkaloid PMT medium pass
Hlup002012F0478830.1 Alkaloid PMT medium pass
Hlup002012F0478840.1 Alkaloid PMT medium pass
Hlup002012F0478850.1 Alkaloid PMT low borderline
Hlup002231F0508670.1 Alkaloid PMT medium borderline
Hlup002879F0583520.1 Alkaloid PMT low borderline
Hlup002985F0595350.1 Alkaloid PMT medium pass
Hlup003013F0598390.1 Alkaloid PMT medium borderline
Hlup003254F0622260.1 Alkaloid PMT medium pass
Hlup003333F0630130.1 Alkaloid PMT low borderline
Hlup003454F0640200.1 Alkaloid PMT low borderline
Hlup003685F0659710.1 Alkaloid PMT low borderline
Hlup003685F0659720.1 Alkaloid PMT low borderline
Hlup003685F0659730.1 Alkaloid PMT low borderline
Hlup003988F0682910.1 Alkaloid PMT medium pass
Hlup004053F0688360.1 Alkaloid PMT medium pass
Hlup004168F0697020.1 Alkaloid PMT low borderline
Hlup004440F0717290.1 Alkaloid PMT medium borderline
Hlup004790F0741040.1 Alkaloid PMT low borderline
Hlup004818F0743490.1 Alkaloid PMT low borderline