PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3816
Candidate Protein Records
3048
Pathway-Level Records
7727
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Hlup005050F0759240.1 Alkaloid PMT low borderline
Hlup005510F0783380.1 Alkaloid PMT medium pass
Hlup005535F0784690.1 Alkaloid PMT low borderline
Hlup005535F0784720.1 Alkaloid PMT low borderline
Hlup005535F0784730.1 Alkaloid PMT low borderline
Hlup005586F0787380.1 Alkaloid PMT medium pass
Hlup005614F0788860.1 Alkaloid PMT low borderline
Hlup007159F0847790.1 Alkaloid PMT low borderline
Hlup007264F0851200.1 Alkaloid PMT medium borderline
Hlup007512F0858500.1 Alkaloid PMT medium pass
Hlup008803F0885490.1 Alkaloid PMT low borderline
Hlup009782F0898680.1 Alkaloid PMT low borderline
Hlup009853F0899410.1 Alkaloid PMT low borderline
Hlup009853F0899420.1 Alkaloid PMT low borderline
Hlup010744F0907050.1 Alkaloid PMT medium borderline
Hlup011304F0910330.1 Alkaloid PMT low borderline
Hlup000012F0014320.1 Alkaloid PYKS low borderline
Hlup000044F0035840.1 Alkaloid PYKS low borderline
Hlup000179F0094890.1 Alkaloid PYKS low borderline
Hlup000199F0103550.1 Alkaloid PYKS low borderline
Hlup000203F0105190.1 Alkaloid PYKS medium pass
Hlup000203F0105210.1 Alkaloid PYKS high pass
Hlup000231F0114880.1 Alkaloid PYKS low borderline
Hlup000254F0123820.1 Alkaloid PYKS low borderline
Hlup000257F0124820.1 Alkaloid PYKS low borderline
Hlup000463F0184220.1 Alkaloid PYKS low borderline
Hlup000526F0200980.1 Alkaloid PYKS low borderline
Hlup000539F0203960.1 Alkaloid PYKS low borderline
Hlup000707F0246290.1 Alkaloid PYKS low borderline
Hlup000948F0298070.1 Alkaloid PYKS low borderline
Hlup001327F0373010.1 Alkaloid PYKS low borderline
Hlup001329F0374120.1 Alkaloid PYKS high pass
Hlup001329F0374130.1 Alkaloid PYKS high pass
Hlup001329F0374140.1 Alkaloid PYKS high pass
Hlup001329F0374160.1 Alkaloid PYKS high pass
Hlup001329F0374170.1 Alkaloid PYKS high pass
Hlup001432F0393010.1 Alkaloid PYKS low borderline
Hlup001483F0402100.1 Alkaloid PYKS low borderline
Hlup001764F0445790.1 Alkaloid PYKS low borderline
Hlup001790F0450370.1 Alkaloid PYKS low borderline
Hlup001847F0457690.1 Alkaloid PYKS low borderline
Hlup001914F0465720.1 Alkaloid PYKS low borderline
Hlup002037F0482690.1 Alkaloid PYKS low borderline
Hlup002230F0508580.1 Alkaloid PYKS medium pass
Hlup002397F0528760.1 Alkaloid PYKS high pass
Hlup002397F0528770.1 Alkaloid PYKS high pass
Hlup002397F0528790.1 Alkaloid PYKS high pass
Hlup002519F0542740.1 Alkaloid PYKS low borderline
Hlup003896F0675980.1 Alkaloid PYKS high pass
Hlup003896F0676030.1 Alkaloid PYKS high pass