PlantSME Plant secondary metabolism enzyme database

Humulus lupulus (humulus_lupulus)

Imported from atlas release summary for Humulus lupulus.

3048
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 933 19 BAHD (329) View species results
Alkaloid pathway 596 25 7DLGT (136) View species results
Phenylpropanoid pathway 574 12 POD (219) View species results
Flavonoid pathway 412 14 UFGT (267) View species results
Rosmarinic acid pathway 310 7 C4H (102) View species results
Steroid pathway 223 14 CAS (144) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2744 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 664 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Hlup001199F0349570.1 Alkaloid 7DLGT medium pass
Hlup001199F0349590.1 Alkaloid 7DLGT low borderline
Hlup001199F0349610.1 Alkaloid 7DLGT medium pass
Hlup001199F0349620.1 Alkaloid 7DLGT medium pass
Hlup001228F0355400.1 Alkaloid 7DLGT medium pass
Hlup001257F0359430.1 Alkaloid 7DLGT low borderline
Hlup001257F0359440.1 Alkaloid 7DLGT low borderline
Hlup001302F0368030.1 Alkaloid 7DLGT low borderline
Hlup001326F0372890.1 Alkaloid 7DLGT low borderline
Hlup001375F0382060.1 Alkaloid 7DLGT medium pass
Hlup001375F0382070.1 Alkaloid 7DLGT low borderline
Hlup001377F0382760.1 Alkaloid 7DLGT medium pass
Hlup001395F0386010.1 Alkaloid 7DLGT low borderline
Hlup001395F0386020.1 Alkaloid 7DLGT low borderline
Hlup001395F0386030.1 Alkaloid 7DLGT low borderline
Hlup001395F0386040.1 Alkaloid 7DLGT medium pass
Hlup001395F0386050.1 Alkaloid 7DLGT low borderline
Hlup001395F0386060.1 Alkaloid 7DLGT low borderline
Hlup001395F0386070.1 Alkaloid 7DLGT medium pass
Hlup001395F0386080.1 Alkaloid 7DLGT low borderline
Hlup001400F0387250.1 Alkaloid 7DLGT medium pass
Hlup001400F0387260.1 Alkaloid 7DLGT low borderline
Hlup001478F0401220.1 Alkaloid 7DLGT medium pass
Hlup001478F0401230.1 Alkaloid 7DLGT low borderline
Hlup001629F0424990.1 Alkaloid 7DLGT low borderline
Hlup001642F0426830.1 Alkaloid 7DLGT low borderline
Hlup001642F0426890.1 Alkaloid 7DLGT low borderline
Hlup001642F0426920.1 Alkaloid 7DLGT medium pass
Hlup001644F0427720.1 Alkaloid 7DLGT low borderline
Hlup001840F0456360.1 Alkaloid 7DLGT low borderline
Hlup001916F0465970.1 Alkaloid 7DLGT low borderline
Hlup001916F0466050.1 Alkaloid 7DLGT low borderline
Hlup001916F0466080.1 Alkaloid 7DLGT medium pass
Hlup001916F0466090.1 Alkaloid 7DLGT medium pass
Hlup001930F0467780.1 Alkaloid 7DLGT high pass
Hlup001930F0467820.1 Alkaloid 7DLGT low borderline
Hlup001930F0467890.1 Alkaloid 7DLGT high pass
Hlup001968F0473000.1 Alkaloid 7DLGT low borderline
Hlup002015F0479440.1 Alkaloid 7DLGT low borderline
Hlup002015F0479620.1 Alkaloid 7DLGT low borderline
Hlup002053F0485220.1 Alkaloid 7DLGT low borderline
Hlup002068F0486960.1 Alkaloid 7DLGT medium pass
Hlup002235F0509190.1 Alkaloid 7DLGT low borderline
Hlup002395F0528280.1 Alkaloid 7DLGT low borderline
Hlup002530F0544120.1 Alkaloid 7DLGT low borderline
Hlup002558F0547550.1 Alkaloid 7DLGT low borderline
Hlup002685F0562020.1 Alkaloid 7DLGT low borderline
Hlup002714F0565610.1 Alkaloid 7DLGT high pass
Hlup002742F0568830.1 Alkaloid 7DLGT medium pass
Hlup002751F0569870.1 Alkaloid 7DLGT medium pass