Humulus lupulus (humulus_lupulus)
Imported from atlas release summary for Humulus lupulus.
3816
Candidate Protein Records
3048
Pathway-Level Records
7727
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
7727
Family-Level Calls
BAHD
6.07%
C4H
6.02%
C3'H/CYP98A
4.96%
UGT
4.17%
7DLGT
3.82%
UFGT
3.69%
CYP76
3.69%
4CL
3.61%
Other Families
63.98%
More Families (98)
CAS
256
3.31%
POD
248
3.21%
IFS
231
2.99%
T3O
216
2.8%
F3H
195
2.52%
DWF4/CYP90B1
183
2.37%
F3'H/CYP75B
161
2.08%
CAD
148
1.92%
BR6OX2/CYP85A2
146
1.89%
NMT
128
1.66%
HCT
113
1.46%
CODM/T6ODM
110
1.42%
H6H
106
1.37%
G8O/G8H
103
1.33%
CYP71
99
1.28%
STR
97
1.26%
GES
89
1.15%
TPS
89
1.15%
CYP90D1
85
1.1%
AACT
85
1.1%
T16H
84
1.09%
PMK
83
1.07%
RAS
82
1.06%
TAT
79
1.02%
SMT1/SMT2/SMT3
79
1.02%
TRI/TRII
69
0.89%
PAL
66
0.85%
CSE
66
0.85%
LAC
62
0.8%
ANR
59
0.76%
LAMT
56
0.72%
PMT
55
0.71%
IO
55
0.71%
FNS
53
0.69%
F5H/CYP84A
52
0.67%
HMGR
51
0.66%
SGD
50
0.65%
F3'5'H/CYP75A
50
0.65%
GS
48
0.62%
PYKS
46
0.6%
TYDC_DDC
46
0.6%
NCS
44
0.57%
COMT
43
0.56%
BBE
41
0.53%
IFR
37
0.48%
7DLH
33
0.43%
16OMT
32
0.41%
TDC
27
0.35%
CYP51G1
27
0.35%
8HGO
26
0.34%
ANS/LDOX
26
0.34%
COR
22
0.28%
DFR
21
0.27%
CCR
21
0.27%
SLS
19
0.25%
CHS
19
0.25%
BR6OX1/CYP85A1
18
0.23%
ROT3/CYP90C1
18
0.23%
HPPR
16
0.21%
MVD
16
0.21%
6OMT_4OMT_SOMT
15
0.19%
DWF5
14
0.18%
SQS/FDFT1
14
0.18%
CNMT
13
0.17%
DXR
13
0.17%
CYP719
12
0.16%
CCoAOMT
12
0.16%
SQE
12
0.16%
MPO
10
0.13%
ISY
10
0.13%
CPD/CYP90A1
10
0.13%
FPPS
10
0.13%
XMT_MXMT_DXMT
9
0.12%
SMO1/SMO2
9
0.12%
CHI
8
0.1%
CPR
8
0.1%
IDI
8
0.1%
GGPPS
8
0.1%
CYP80B1
7
0.09%
DET2
6
0.08%
DWF7
6
0.08%
CPI1
5
0.06%
DWF1
4
0.05%
DXS
4
0.05%
MCT/IspD
4
0.05%
FLS
3
0.04%
CMK/IspE
3
0.04%
MVK
3
0.04%
HMGS
3
0.04%
MDS/IspF
3
0.04%
CYP80F1
2
0.03%
ODC
2
0.03%
ADC
2
0.03%
FK
2
0.03%
GPPS
2
0.03%
HYD1
1
0.01%
HDR/IspH
1
0.01%
HDS/IspG
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 933 | 19 | BAHD (329) | View species results |
| Alkaloid pathway | 596 | 25 | 7DLGT (136) | View species results |
| Phenylpropanoid pathway | 574 | 12 | POD (219) | View species results |
| Flavonoid pathway | 412 | 14 | UFGT (267) | View species results |
| Rosmarinic acid pathway | 310 | 7 | C4H (102) | View species results |
| Steroid pathway | 223 | 14 | CAS (144) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2744 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 664 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Hlup001553F0413460.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup001647F0428170.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00003__sp_P17770_TDC_CATRO |
| Hlup001647F0428370.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00003__sp_P17770_TDC_CATRO |
| Hlup002139F0496020.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup002139F0496060.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup002139F0496130.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup002139F0496150.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup002139F0496170.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup002707F0564720.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup005076F0760140.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00003__sp_P17770_TDC_CATRO |
| Hlup005442F0780210.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00003__sp_P17770_TDC_CATRO |
| Hlup005442F0780220.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00003__sp_P17770_TDC_CATRO |
| Hlup005576F0786820.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup005576F0786850.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup005576F0786880.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup006484F0825390.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup006484F0825400.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup006484F0825420.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH |
| Hlup007869F0867020.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| Hlup007874F0867170.1 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00003__sp_P17770_TDC_CATRO |
| Hlup000528F0201250.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00002__sp_A0A0S2PM92_TCS1F_CAMCR |
| Hlup000577F0214510.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA |
| Hlup000577F0214570.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA |
| Hlup001087F0326770.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00001__sp_A0A0S2PM82_TCS3_CAMSI |
| Hlup001955F0471160.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00002__sp_A0A0S2PM92_TCS1F_CAMCR |
| Hlup003641F0656100.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00008__sp_Q8H0D3_DXMT2_COFAR |
| Hlup004282F0704570.1 | Alkaloid | XMT_MXMT_DXMT | low | borderline | XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA |
| Hlup006221F0815160.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA |
| Hlup006549F0827990.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA |
| Hlup000000F0000720.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Hlup000002F0003570.1 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| Hlup000026F0024240.1 | Flavonoid | 4CL | medium | pass | 4CL__00009__sp_Q67W82_4CL4_ORYSJ |
| Hlup000026F0025150.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Hlup000026F0025200.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Hlup000029F0027000.1 | Flavonoid | 4CL | low | borderline | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Hlup000097F0061100.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hlup000097F0061110.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Hlup000097F0061130.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Hlup000097F0061140.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Hlup000189F0098530.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Hlup000193F0100040.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Hlup000399F0167080.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Hlup000411F0170410.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Hlup000466F0185200.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Hlup000516F0198090.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hlup000516F0198100.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Hlup000589F0217610.1 | Flavonoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hlup000612F0223000.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Hlup000623F0225560.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Hlup000626F0227360.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |