PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
LONjap01G0018130.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap01G0043480.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap02G0035340.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap02G0035410.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap02G0043050.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap03G0023810.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap03G0032200.1 Steroid BR6OX1/CYP85A1 low borderline
LONjap04G0002690.1 Steroid BR6OX1/CYP85A1 low borderline
LONjap04G0003300.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap04G0003310.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap04G0027260.1 Steroid BR6OX1/CYP85A1 low borderline
LONjap04G0027310.1 Steroid BR6OX1/CYP85A1 low borderline
LONjap05G0013460.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap05G0013850.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap05G0015570.1 Steroid BR6OX1/CYP85A1 low borderline
LONjap05G0029560.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap06G0010240.1 Steroid BR6OX1/CYP85A1 low borderline
LONjap07G0007630.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap07G0030340.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap08G0000060.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap08G0017990.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap08G0021530.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap08G0021540.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap08G0021650.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap08G0027010.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap08G0027370.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap09G0016210.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjapGWHAAZE000000150000430.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjapGWHAAZE000000160000630.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjapGWHAAZE000000180001000.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjapGWHAAZE000000360004410.1 Steroid BR6OX1/CYP85A1 low borderline
LONjapGWHAAZE000000530006010.1 Steroid BR6OX1/CYP85A1 medium borderline
LONjap01G0003130.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0005660.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018440.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018480.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018570.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018600.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018610.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018650.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018660.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018700.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018710.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018730.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018750.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0018990.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019000.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019010.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019030.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019050.1 Steroid BR6OX2/CYP85A2 low borderline