PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
LONjap01G0019070.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019080.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019090.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019110.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019170.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019190.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019200.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019280.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019300.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0019320.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0025720.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0025740.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0033870.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0039720.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0041580.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap01G0048100.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap02G0001450.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap02G0001680.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap02G0010780.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap02G0012380.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap02G0019350.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap02G0040180.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap02G0042930.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap02G0043650.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap02G0045020.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap02G0045990.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap03G0009560.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap03G0032240.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap03G0032260.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0018390.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0018430.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap04G0018440.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0018690.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0027290.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0027380.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0031700.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0031720.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0033650.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap05G0008480.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap05G0029400.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap05G0029530.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap05G0029580.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap05G0029590.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap05G0030390.1 Steroid BR6OX2/CYP85A2 medium pass
LONjap05G0030410.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap06G0002580.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap06G0010060.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap06G0011640.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap06G0023830.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap06G0026440.1 Steroid BR6OX2/CYP85A2 low borderline