PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap04G0013900.1 Terpenoid DXS medium pass
LONjap04G0013930.1 Terpenoid DXS medium pass
LONjap04G0013940.1 Terpenoid DXS medium pass
LONjap04G0013950.1 Terpenoid DXS medium pass
LONjap07G0026800.1 Terpenoid DXS low borderline
LONjap07G0028600.1 Terpenoid DXS medium pass
LONjap09G0002400.1 Terpenoid DXS medium pass
LONjap09G0030340.1 Terpenoid DXS medium pass
LONjap09G0030350.1 Terpenoid DXS medium pass
LONjap09G0032620.1 Terpenoid DXS medium pass
LONjapGWHAAZE000000400004900.1 Terpenoid DXS medium pass
LONjapGWHAAZE000000640006920.1 Terpenoid DXS medium pass
LONjapGWHAAZE000001220014750.1 Terpenoid DXS medium pass
LONjapGWHAAZE000001220014760.1 Terpenoid DXS medium pass
LONjap01G0029710.1 Terpenoid FPPS medium pass
LONjap01G0041400.1 Terpenoid FPPS medium borderline
LONjap01G0041410.1 Terpenoid FPPS medium borderline
LONjap02G0004560.1 Terpenoid FPPS medium pass
LONjap02G0018550.1 Terpenoid FPPS low borderline
LONjap02G0043780.1 Terpenoid FPPS medium pass
LONjap02G0043790.1 Terpenoid FPPS low borderline
LONjap02G0047310.1 Terpenoid FPPS medium pass
LONjap04G0012450.1 Terpenoid FPPS medium pass
LONjap08G0011120.1 Terpenoid FPPS medium pass
LONjap01G0025750.1 Terpenoid GGPPS medium borderline
LONjap01G0025760.1 Terpenoid GGPPS medium borderline
LONjap01G0025770.1 Terpenoid GGPPS medium pass
LONjap01G0041270.1 Terpenoid GGPPS medium borderline
LONjap02G0024480.1 Terpenoid GGPPS medium borderline
LONjap04G0002340.1 Terpenoid GGPPS medium borderline
LONjap04G0013800.1 Terpenoid GGPPS medium borderline
LONjap05G0011320.1 Terpenoid GGPPS medium borderline
LONjap07G0014390.1 Terpenoid GGPPS medium borderline
LONjap07G0021090.1 Terpenoid GGPPS medium borderline
LONjap08G0008440.1 Terpenoid GGPPS medium borderline
LONjap09G0012450.1 Terpenoid GGPPS medium borderline
LONjap09G0031630.1 Terpenoid GGPPS medium borderline
LONjap05G0013260.1 Terpenoid HDR/IspH high pass
LONjap02G0041560.1 Terpenoid HDS/IspG high pass
LONjap02G0041570.1 Terpenoid HDS/IspG high pass
LONjap02G0027420.1 Terpenoid HMGR medium pass
LONjap04G0012890.1 Terpenoid HMGR medium pass
LONjap04G0029260.1 Terpenoid HMGR medium pass
LONjap05G0010860.1 Terpenoid HMGR medium pass
LONjap09G0013000.1 Terpenoid HMGR medium pass
LONjap02G0011740.1 Terpenoid HMGS high pass
LONjap02G0011850.1 Terpenoid HMGS medium pass
LONjap02G0011860.1 Terpenoid HMGS high pass
LONjap08G0013950.1 Terpenoid HMGS high pass
LONjap09G0014400.1 Terpenoid HMGS low borderline