PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap01G0016700.1 Terpenoid IDI medium pass
LONjapGWHAAZE000000400005190.1 Terpenoid IDI medium pass
LONjapGWHAAZE000001040012680.1 Terpenoid IDI medium pass
LONjap01G0042920.1 Terpenoid MCT/IspD low borderline
LONjap02G0019750.1 Terpenoid MCT/IspD low borderline
LONjap02G0035780.1 Terpenoid MCT/IspD low borderline
LONjap05G0018570.1 Terpenoid MCT/IspD high pass
LONjap05G0018580.1 Terpenoid MCT/IspD medium pass
LONjap05G0018600.1 Terpenoid MCT/IspD high pass
LONjap02G0010550.1 Terpenoid MDS/IspF high pass
LONjap02G0001750.1 Terpenoid MVD medium pass
LONjap03G0026390.1 Terpenoid MVD low borderline
LONjap03G0026420.1 Terpenoid MVD medium pass
LONjap05G0004400.1 Terpenoid MVD low borderline
LONjap05G0024570.1 Terpenoid MVK medium pass
LONjap05G0024580.1 Terpenoid MVK medium pass
LONjap05G0024620.1 Terpenoid MVK low borderline
LONjap05G0024680.1 Terpenoid MVK medium pass
LONjap05G0024700.1 Terpenoid MVK medium pass
LONjap05G0024720.1 Terpenoid MVK medium pass
LONjap05G0024730.1 Terpenoid MVK medium pass
LONjap05G0024740.1 Terpenoid MVK medium pass
LONjap05G0024760.1 Terpenoid MVK medium pass
LONjap07G0016580.1 Terpenoid MVK low borderline
LONjap08G0001330.1 Terpenoid MVK low borderline
LONjap08G0001340.1 Terpenoid MVK low borderline
LONjap09G0000420.1 Terpenoid MVK medium pass
LONjap09G0000490.1 Terpenoid MVK medium pass
LONjap09G0012880.1 Terpenoid MVK low borderline
LONjap08G0016880.1 Terpenoid PMK high pass
LONjapGWHAAZE000000940010640.1 Terpenoid PMK low borderline
LONjap01G0011050.1 Terpenoid TPS medium pass
LONjap01G0011060.1 Terpenoid TPS medium pass
LONjap01G0011070.1 Terpenoid TPS medium pass
LONjap01G0011080.1 Terpenoid TPS medium pass
LONjap01G0011890.1 Terpenoid TPS medium pass
LONjap01G0011900.1 Terpenoid TPS medium pass
LONjap01G0011910.1 Terpenoid TPS medium pass
LONjap01G0015230.1 Terpenoid TPS medium pass
LONjap01G0015240.1 Terpenoid TPS medium pass
LONjap01G0015250.1 Terpenoid TPS medium pass
LONjap01G0015510.1 Terpenoid TPS medium pass
LONjap01G0015540.1 Terpenoid TPS low borderline
LONjap01G0015550.1 Terpenoid TPS medium pass
LONjap01G0015560.1 Terpenoid TPS medium pass
LONjap01G0015710.1 Terpenoid TPS medium pass
LONjap01G0017830.1 Terpenoid TPS medium pass
LONjap01G0017870.1 Terpenoid TPS medium pass
LONjap01G0017900.1 Terpenoid TPS medium pass
LONjap01G0017920.1 Terpenoid TPS medium pass