PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap06G0019350.1 Alkaloid CODM/T6ODM medium borderline
LONjap06G0021850.1 Alkaloid CODM/T6ODM medium borderline
LONjap07G0009670.1 Alkaloid CODM/T6ODM medium borderline
LONjap07G0009690.1 Alkaloid CODM/T6ODM low borderline
LONjap07G0009810.1 Alkaloid CODM/T6ODM medium borderline
LONjap07G0013620.1 Alkaloid CODM/T6ODM medium borderline
LONjap07G0028500.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0001180.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0003330.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0004170.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0007380.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0008300.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0008340.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0013360.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0015260.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0024070.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0024080.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0024090.1 Alkaloid CODM/T6ODM medium borderline
LONjap08G0024100.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0006970.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0007210.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0010050.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0010060.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0010070.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0010080.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0010090.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0022550.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0023590.1 Alkaloid CODM/T6ODM medium borderline
LONjap09G0031060.1 Alkaloid CODM/T6ODM medium borderline
LONjapGWHAAZE000000640006950.1 Alkaloid CODM/T6ODM medium borderline
LONjapGWHAAZE000000850007900.1 Alkaloid CODM/T6ODM medium borderline
LONjapGWHAAZE000001220014710.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0005340.1 Alkaloid COR medium pass
LONjap02G0005360.1 Alkaloid COR medium pass
LONjap02G0005370.1 Alkaloid COR medium pass
LONjap03G0008110.1 Alkaloid COR medium pass
LONjap03G0008120.1 Alkaloid COR medium pass
LONjap03G0022350.1 Alkaloid COR medium pass
LONjap03G0028530.1 Alkaloid COR medium pass
LONjap03G0033570.1 Alkaloid COR medium pass
LONjap03G0033580.1 Alkaloid COR medium pass
LONjap03G0034230.1 Alkaloid COR medium pass
LONjap05G0012300.1 Alkaloid COR medium pass
LONjap05G0012360.1 Alkaloid COR medium pass
LONjap06G0021220.1 Alkaloid COR medium pass
LONjap06G0021230.1 Alkaloid COR medium pass
LONjap06G0021240.1 Alkaloid COR medium pass
LONjap07G0027580.1 Alkaloid COR medium pass
LONjap08G0001800.1 Alkaloid COR medium pass
LONjapGWHAAZE000000640006940.1 Alkaloid COR medium pass