PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjapGWHAAZE000001220014720.1 Alkaloid COR medium pass
LONjap01G0018230.1 Alkaloid CYP719 medium borderline
LONjap01G0048100.1 Alkaloid CYP719 medium borderline
LONjap02G0002330.1 Alkaloid CYP719 medium borderline
LONjap02G0022770.1 Alkaloid CYP719 medium borderline
LONjap02G0044720.1 Alkaloid CYP719 medium borderline
LONjap04G0002690.1 Alkaloid CYP719 medium borderline
LONjap04G0027420.1 Alkaloid CYP719 low borderline
LONjap06G0020560.1 Alkaloid CYP719 medium borderline
LONjap07G0022260.1 Alkaloid CYP719 medium borderline
LONjap08G0013140.1 Alkaloid CYP719 medium borderline
LONjap08G0025890.1 Alkaloid CYP719 low borderline
LONjap03G0004900.1 Alkaloid CYP80B1 low borderline
LONjap03G0005380.1 Alkaloid CYP80B1 medium borderline
LONjap04G0027260.1 Alkaloid CYP80B1 medium borderline
LONjap04G0027270.1 Alkaloid CYP80B1 medium borderline
LONjap06G0002620.1 Alkaloid CYP80B1 medium borderline
LONjap06G0002670.1 Alkaloid CYP80B1 medium borderline
LONjap06G0002800.1 Alkaloid CYP80B1 medium borderline
LONjap06G0027130.1 Alkaloid CYP80B1 medium borderline
LONjap08G0014070.1 Alkaloid CYP80B1 medium borderline
LONjap08G0014080.1 Alkaloid CYP80B1 medium borderline
LONjap08G0014090.1 Alkaloid CYP80B1 medium borderline
LONjapGWHAAZE000001350015310.1 Alkaloid CYP80B1 medium borderline
LONjap01G0035140.1 Alkaloid CYP80F1 medium borderline
LONjap01G0041580.1 Alkaloid CYP80F1 medium borderline
LONjap06G0011620.1 Alkaloid CYP80F1 medium borderline
LONjap06G0026440.1 Alkaloid CYP80F1 medium borderline
LONjap08G0000870.1 Alkaloid CYP80F1 medium borderline
LONjap08G0000880.1 Alkaloid CYP80F1 medium borderline
LONjap08G0000900.1 Alkaloid CYP80F1 medium borderline
LONjap01G0005770.1 Alkaloid G8O/G8H low borderline
LONjap01G0005840.1 Alkaloid G8O/G8H low borderline
LONjap01G0005910.1 Alkaloid G8O/G8H medium borderline
LONjap01G0024880.1 Alkaloid G8O/G8H medium borderline
LONjap01G0024910.1 Alkaloid G8O/G8H medium borderline
LONjap01G0035130.1 Alkaloid G8O/G8H medium borderline
LONjap02G0007640.1 Alkaloid G8O/G8H medium borderline
LONjap02G0012360.1 Alkaloid G8O/G8H medium borderline
LONjap02G0012380.1 Alkaloid G8O/G8H low borderline
LONjap02G0028990.1 Alkaloid G8O/G8H medium pass
LONjap02G0029450.1 Alkaloid G8O/G8H medium borderline
LONjap02G0036400.1 Alkaloid G8O/G8H medium borderline
LONjap04G0001440.1 Alkaloid G8O/G8H medium pass
LONjap04G0001890.1 Alkaloid G8O/G8H medium borderline
LONjap04G0007780.1 Alkaloid G8O/G8H medium borderline
LONjap04G0010360.1 Alkaloid G8O/G8H medium borderline
LONjap04G0011330.1 Alkaloid G8O/G8H medium borderline
LONjap04G0014900.1 Alkaloid G8O/G8H medium borderline
LONjap04G0014920.1 Alkaloid G8O/G8H medium borderline