PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap04G0014940.1 Alkaloid G8O/G8H medium borderline
LONjap04G0027320.1 Alkaloid G8O/G8H medium borderline
LONjap04G0027330.1 Alkaloid G8O/G8H medium borderline
LONjap04G0028180.1 Alkaloid G8O/G8H medium borderline
LONjap05G0008270.1 Alkaloid G8O/G8H medium borderline
LONjap05G0008280.1 Alkaloid G8O/G8H medium borderline
LONjap05G0008320.1 Alkaloid G8O/G8H medium borderline
LONjap05G0009230.1 Alkaloid G8O/G8H medium borderline
LONjap05G0022240.1 Alkaloid G8O/G8H medium borderline
LONjap05G0022260.1 Alkaloid G8O/G8H medium borderline
LONjap05G0022290.1 Alkaloid G8O/G8H medium borderline
LONjap05G0022410.1 Alkaloid G8O/G8H medium borderline
LONjap05G0029080.1 Alkaloid G8O/G8H medium borderline
LONjap05G0029100.1 Alkaloid G8O/G8H medium borderline
LONjap05G0029300.1 Alkaloid G8O/G8H medium borderline
LONjap05G0029310.1 Alkaloid G8O/G8H medium borderline
LONjap06G0002770.1 Alkaloid G8O/G8H low borderline
LONjap06G0004480.1 Alkaloid G8O/G8H low borderline
LONjap06G0011610.1 Alkaloid G8O/G8H medium pass
LONjap07G0001200.1 Alkaloid G8O/G8H medium pass
LONjap07G0001210.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001230.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001240.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001250.1 Alkaloid G8O/G8H medium pass
LONjap07G0001260.1 Alkaloid G8O/G8H medium pass
LONjap07G0001270.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001290.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001300.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001320.1 Alkaloid G8O/G8H medium pass
LONjap07G0001350.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001360.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001380.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001390.1 Alkaloid G8O/G8H medium pass
LONjap07G0001400.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001410.1 Alkaloid G8O/G8H medium borderline
LONjap07G0001420.1 Alkaloid G8O/G8H medium pass
LONjap07G0001450.1 Alkaloid G8O/G8H medium borderline
LONjap08G0014100.1 Alkaloid G8O/G8H medium borderline
LONjap08G0014250.1 Alkaloid G8O/G8H medium pass
LONjap08G0014260.1 Alkaloid G8O/G8H medium borderline
LONjap08G0014500.1 Alkaloid G8O/G8H low borderline
LONjap08G0016170.1 Alkaloid G8O/G8H medium pass
LONjap08G0016180.1 Alkaloid G8O/G8H medium pass
LONjap08G0027360.1 Alkaloid G8O/G8H medium borderline
LONjap08G0027370.1 Alkaloid G8O/G8H medium borderline
LONjap09G0014090.1 Alkaloid G8O/G8H medium borderline
LONjap09G0014110.1 Alkaloid G8O/G8H medium borderline
LONjap09G0014130.1 Alkaloid G8O/G8H medium borderline
LONjap09G0014150.1 Alkaloid G8O/G8H low borderline
LONjap09G0014430.1 Alkaloid G8O/G8H low borderline