PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap09G0028060.1 Alkaloid G8O/G8H low borderline
LONjapGWHAAZE000000150000290.1 Alkaloid G8O/G8H medium borderline
LONjapGWHAAZE000000160000620.1 Alkaloid G8O/G8H medium borderline
LONjapGWHAAZE000000180001000.1 Alkaloid G8O/G8H medium borderline
LONjapGWHAAZE000000360004390.1 Alkaloid G8O/G8H medium borderline
LONjapGWHAAZE000000360004400.1 Alkaloid G8O/G8H medium borderline
LONjapGWHAAZE000000360004410.1 Alkaloid G8O/G8H low borderline
LONjapGWHAAZE000000530005990.1 Alkaloid G8O/G8H medium borderline
LONjapGWHAAZE000000530006010.1 Alkaloid G8O/G8H medium borderline
LONjapGWHAAZE000001360015320.1 Alkaloid G8O/G8H low borderline
LONjap01G0011070.1 Alkaloid GES medium pass
LONjap01G0011080.1 Alkaloid GES medium pass
LONjap01G0011890.1 Alkaloid GES medium pass
LONjap01G0011900.1 Alkaloid GES medium pass
LONjap01G0011910.1 Alkaloid GES medium pass
LONjap01G0015230.1 Alkaloid GES low borderline
LONjap01G0015240.1 Alkaloid GES medium pass
LONjap01G0015250.1 Alkaloid GES low borderline
LONjap01G0015510.1 Alkaloid GES medium pass
LONjap01G0015540.1 Alkaloid GES medium pass
LONjap01G0015550.1 Alkaloid GES medium pass
LONjap01G0015560.1 Alkaloid GES low borderline
LONjap01G0015710.1 Alkaloid GES medium pass
LONjap01G0017830.1 Alkaloid GES low borderline
LONjap01G0017900.1 Alkaloid GES low borderline
LONjap01G0017920.1 Alkaloid GES low borderline
LONjap01G0017950.1 Alkaloid GES low borderline
LONjap01G0017960.1 Alkaloid GES low borderline
LONjap01G0017970.1 Alkaloid GES medium pass
LONjap01G0022850.1 Alkaloid GES medium pass
LONjap01G0022860.1 Alkaloid GES medium pass
LONjap01G0022880.1 Alkaloid GES medium pass
LONjap01G0022960.1 Alkaloid GES medium pass
LONjap01G0047670.1 Alkaloid GES medium pass
LONjap01G0047680.1 Alkaloid GES medium pass
LONjap01G0047690.1 Alkaloid GES low borderline
LONjap01G0047700.1 Alkaloid GES medium pass
LONjap02G0000460.1 Alkaloid GES medium pass
LONjap02G0000470.1 Alkaloid GES medium pass
LONjap02G0012990.1 Alkaloid GES medium pass
LONjap02G0013000.1 Alkaloid GES medium pass
LONjap02G0015870.1 Alkaloid GES medium pass
LONjap02G0015880.1 Alkaloid GES medium pass
LONjap02G0016400.1 Alkaloid GES medium pass
LONjap02G0016410.1 Alkaloid GES medium pass
LONjap02G0020790.1 Alkaloid GES low borderline
LONjap02G0020800.1 Alkaloid GES medium pass
LONjap02G0020820.1 Alkaloid GES medium pass
LONjap02G0020830.1 Alkaloid GES medium pass
LONjap02G0020840.1 Alkaloid GES medium pass