PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap02G0033130.1 Alkaloid GES medium pass
LONjap02G0033270.1 Alkaloid GES medium pass
LONjap02G0033280.1 Alkaloid GES low borderline
LONjap02G0033310.1 Alkaloid GES medium pass
LONjap02G0036060.1 Alkaloid GES medium pass
LONjap02G0048230.1 Alkaloid GES low borderline
LONjap03G0008890.1 Alkaloid GES medium pass
LONjap03G0008900.1 Alkaloid GES low borderline
LONjap03G0008930.1 Alkaloid GES low borderline
LONjap03G0009040.1 Alkaloid GES medium pass
LONjap03G0009050.1 Alkaloid GES medium pass
LONjap03G0009200.1 Alkaloid GES medium pass
LONjap03G0009420.1 Alkaloid GES medium pass
LONjap03G0009430.1 Alkaloid GES medium pass
LONjap03G0009440.1 Alkaloid GES medium pass
LONjap03G0012330.1 Alkaloid GES medium pass
LONjap03G0012340.1 Alkaloid GES medium pass
LONjap03G0012380.1 Alkaloid GES medium pass
LONjap03G0012410.1 Alkaloid GES medium pass
LONjap03G0012420.1 Alkaloid GES low borderline
LONjap03G0012440.1 Alkaloid GES low borderline
LONjap03G0012470.1 Alkaloid GES low borderline
LONjap03G0012520.1 Alkaloid GES low borderline
LONjap03G0012530.1 Alkaloid GES low borderline
LONjap03G0012540.1 Alkaloid GES low borderline
LONjap03G0012550.1 Alkaloid GES medium pass
LONjap03G0022270.1 Alkaloid GES medium pass
LONjap05G0027850.1 Alkaloid GES medium pass
LONjap06G0006500.1 Alkaloid GES medium pass
LONjap06G0006510.1 Alkaloid GES medium pass
LONjap06G0006830.1 Alkaloid GES medium pass
LONjap06G0006840.1 Alkaloid GES medium pass
LONjap08G0006840.1 Alkaloid GES medium pass
LONjapGWHAAZE000000210001960.1 Alkaloid GES medium pass
LONjapGWHAAZE000000210001970.1 Alkaloid GES low borderline
LONjapGWHAAZE000000210001980.1 Alkaloid GES low borderline
LONjapGWHAAZE000000210001990.1 Alkaloid GES medium pass
LONjapGWHAAZE000000210002010.1 Alkaloid GES medium pass
LONjapGWHAAZE000000210002020.1 Alkaloid GES medium pass
LONjapGWHAAZE000001190014580.1 Alkaloid GES low borderline
LONjapGWHAAZE000001200014590.1 Alkaloid GES medium pass
LONjap01G0004760.1 Alkaloid GS low borderline
LONjap01G0004790.1 Alkaloid GS low borderline
LONjap01G0004860.1 Alkaloid GS low borderline
LONjap01G0005350.1 Alkaloid GS high pass
LONjap01G0025940.1 Alkaloid GS high pass
LONjap01G0026580.1 Alkaloid GS low borderline
LONjap01G0033850.1 Alkaloid GS low borderline
LONjap01G0034280.1 Alkaloid GS low borderline
LONjap01G0047160.1 Alkaloid GS low borderline