PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
LONjap01G0005790.1 Rosmarinic Acid C4H low borderline
LONjap01G0005810.1 Rosmarinic Acid C4H low borderline
LONjap01G0005820.1 Rosmarinic Acid C4H low borderline
LONjap01G0005830.1 Rosmarinic Acid C4H low borderline
LONjap01G0005840.1 Rosmarinic Acid C4H low borderline
LONjap01G0005860.1 Rosmarinic Acid C4H low borderline
LONjap01G0005870.1 Rosmarinic Acid C4H low borderline
LONjap01G0005880.1 Rosmarinic Acid C4H low borderline
LONjap01G0005900.1 Rosmarinic Acid C4H low borderline
LONjap01G0005910.1 Rosmarinic Acid C4H low borderline
LONjap01G0018230.1 Rosmarinic Acid C4H low borderline
LONjap01G0018430.1 Rosmarinic Acid C4H low borderline
LONjap01G0018490.1 Rosmarinic Acid C4H low borderline
LONjap01G0018570.1 Rosmarinic Acid C4H low borderline
LONjap01G0018600.1 Rosmarinic Acid C4H low borderline
LONjap01G0018610.1 Rosmarinic Acid C4H low borderline
LONjap01G0018630.1 Rosmarinic Acid C4H low borderline
LONjap01G0018650.1 Rosmarinic Acid C4H low borderline
LONjap01G0018660.1 Rosmarinic Acid C4H low borderline
LONjap01G0018700.1 Rosmarinic Acid C4H low borderline
LONjap01G0018710.1 Rosmarinic Acid C4H low borderline
LONjap01G0018730.1 Rosmarinic Acid C4H low borderline
LONjap01G0018750.1 Rosmarinic Acid C4H low borderline
LONjap01G0018990.1 Rosmarinic Acid C4H low borderline
LONjap01G0019000.1 Rosmarinic Acid C4H low borderline
LONjap01G0019010.1 Rosmarinic Acid C4H low borderline
LONjap01G0019030.1 Rosmarinic Acid C4H low borderline
LONjap01G0019050.1 Rosmarinic Acid C4H low borderline
LONjap01G0019060.1 Rosmarinic Acid C4H low borderline
LONjap01G0019070.1 Rosmarinic Acid C4H low borderline
LONjap01G0019080.1 Rosmarinic Acid C4H low borderline
LONjap01G0019110.1 Rosmarinic Acid C4H low borderline
LONjap01G0019170.1 Rosmarinic Acid C4H low borderline
LONjap01G0019190.1 Rosmarinic Acid C4H low borderline
LONjap01G0019200.1 Rosmarinic Acid C4H low borderline
LONjap01G0019280.1 Rosmarinic Acid C4H low borderline
LONjap01G0019300.1 Rosmarinic Acid C4H low borderline
LONjap01G0019320.1 Rosmarinic Acid C4H low borderline
LONjap01G0022460.1 Rosmarinic Acid C4H low borderline
LONjap01G0024870.1 Rosmarinic Acid C4H low borderline
LONjap01G0024880.1 Rosmarinic Acid C4H low borderline
LONjap01G0024910.1 Rosmarinic Acid C4H low borderline
LONjap01G0025730.1 Rosmarinic Acid C4H low borderline
LONjap01G0025740.1 Rosmarinic Acid C4H low borderline
LONjap01G0028290.1 Rosmarinic Acid C4H low borderline
LONjap01G0032880.1 Rosmarinic Acid C4H low borderline
LONjap01G0033870.1 Rosmarinic Acid C4H low borderline
LONjap01G0035130.1 Rosmarinic Acid C4H low borderline
LONjap01G0037780.1 Rosmarinic Acid C4H medium pass
LONjap01G0037790.1 Rosmarinic Acid C4H low borderline