PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap01G0037800.1 Rosmarinic Acid C4H low borderline
LONjap01G0037810.1 Rosmarinic Acid C4H low borderline
LONjap01G0037890.1 Rosmarinic Acid C4H low borderline
LONjap01G0039720.1 Rosmarinic Acid C4H medium pass
LONjap01G0041580.1 Rosmarinic Acid C4H low borderline
LONjap01G0045560.1 Rosmarinic Acid C4H low borderline
LONjap01G0048100.1 Rosmarinic Acid C4H low borderline
LONjap02G0001450.1 Rosmarinic Acid C4H low borderline
LONjap02G0003090.1 Rosmarinic Acid C4H low borderline
LONjap02G0007460.1 Rosmarinic Acid C4H low borderline
LONjap02G0007640.1 Rosmarinic Acid C4H low borderline
LONjap02G0007670.1 Rosmarinic Acid C4H medium pass
LONjap02G0007680.1 Rosmarinic Acid C4H medium pass
LONjap02G0008000.1 Rosmarinic Acid C4H low borderline
LONjap02G0012360.1 Rosmarinic Acid C4H low borderline
LONjap02G0012370.1 Rosmarinic Acid C4H medium pass
LONjap02G0012380.1 Rosmarinic Acid C4H low borderline
LONjap02G0019350.1 Rosmarinic Acid C4H low borderline
LONjap02G0022750.1 Rosmarinic Acid C4H low borderline
LONjap02G0022770.1 Rosmarinic Acid C4H low borderline
LONjap02G0025270.1 Rosmarinic Acid C4H low borderline
LONjap02G0028990.1 Rosmarinic Acid C4H low borderline
LONjap02G0029440.1 Rosmarinic Acid C4H low borderline
LONjap02G0029450.1 Rosmarinic Acid C4H low borderline
LONjap02G0029710.1 Rosmarinic Acid C4H low borderline
LONjap02G0036400.1 Rosmarinic Acid C4H medium pass
LONjap02G0040150.1 Rosmarinic Acid C4H low borderline
LONjap02G0040180.1 Rosmarinic Acid C4H low borderline
LONjap02G0042380.1 Rosmarinic Acid C4H medium pass
LONjap02G0042930.1 Rosmarinic Acid C4H low borderline
LONjap02G0043050.1 Rosmarinic Acid C4H low borderline
LONjap02G0044770.1 Rosmarinic Acid C4H medium pass
LONjap02G0044990.1 Rosmarinic Acid C4H low borderline
LONjap02G0045000.1 Rosmarinic Acid C4H low borderline
LONjap02G0045010.1 Rosmarinic Acid C4H low borderline
LONjap02G0045980.1 Rosmarinic Acid C4H medium pass
LONjap02G0045990.1 Rosmarinic Acid C4H medium pass
LONjap02G0046000.1 Rosmarinic Acid C4H low borderline
LONjap03G0006160.1 Rosmarinic Acid C4H low borderline
LONjap03G0008970.1 Rosmarinic Acid C4H low borderline
LONjap03G0009250.1 Rosmarinic Acid C4H low borderline
LONjap03G0009410.1 Rosmarinic Acid C4H low borderline
LONjap03G0009560.1 Rosmarinic Acid C4H low borderline
LONjap03G0012350.1 Rosmarinic Acid C4H low borderline
LONjap03G0012480.1 Rosmarinic Acid C4H low borderline
LONjap03G0012490.1 Rosmarinic Acid C4H low borderline
LONjap03G0023810.1 Rosmarinic Acid C4H low borderline
LONjap03G0026580.1 Rosmarinic Acid C4H low borderline
LONjap03G0030870.1 Rosmarinic Acid C4H medium pass
LONjap03G0030880.1 Rosmarinic Acid C4H low borderline