PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap03G0032260.1 Rosmarinic Acid C4H low borderline
LONjap03G0032270.1 Rosmarinic Acid C4H low borderline
LONjap03G0032280.1 Rosmarinic Acid C4H low borderline
LONjap03G0032320.1 Rosmarinic Acid C4H low borderline
LONjap03G0032820.1 Rosmarinic Acid C4H low borderline
LONjap04G0001440.1 Rosmarinic Acid C4H low borderline
LONjap04G0001890.1 Rosmarinic Acid C4H low borderline
LONjap04G0002620.1 Rosmarinic Acid C4H low borderline
LONjap04G0002630.1 Rosmarinic Acid C4H medium pass
LONjap04G0002640.1 Rosmarinic Acid C4H low borderline
LONjap04G0002690.1 Rosmarinic Acid C4H low borderline
LONjap04G0003300.1 Rosmarinic Acid C4H low borderline
LONjap04G0003310.1 Rosmarinic Acid C4H low borderline
LONjap04G0006730.1 Rosmarinic Acid C4H low borderline
LONjap04G0007780.1 Rosmarinic Acid C4H low borderline
LONjap04G0010260.1 Rosmarinic Acid C4H low borderline
LONjap04G0010610.1 Rosmarinic Acid C4H low borderline
LONjap04G0010950.1 Rosmarinic Acid C4H low borderline
LONjap04G0011180.1 Rosmarinic Acid C4H low borderline
LONjap04G0011330.1 Rosmarinic Acid C4H low borderline
LONjap04G0014900.1 Rosmarinic Acid C4H low borderline
LONjap04G0014920.1 Rosmarinic Acid C4H low borderline
LONjap04G0014940.1 Rosmarinic Acid C4H low borderline
LONjap04G0017340.1 Rosmarinic Acid C4H low borderline
LONjap04G0018490.1 Rosmarinic Acid C4H low borderline
LONjap04G0027260.1 Rosmarinic Acid C4H low borderline
LONjap04G0027270.1 Rosmarinic Acid C4H low borderline
LONjap04G0027290.1 Rosmarinic Acid C4H low borderline
LONjap04G0027310.1 Rosmarinic Acid C4H low borderline
LONjap04G0027320.1 Rosmarinic Acid C4H low borderline
LONjap04G0027330.1 Rosmarinic Acid C4H low borderline
LONjap04G0027340.1 Rosmarinic Acid C4H low borderline
LONjap04G0027370.1 Rosmarinic Acid C4H medium pass
LONjap04G0027380.1 Rosmarinic Acid C4H low borderline
LONjap04G0027610.1 Rosmarinic Acid C4H low borderline
LONjap04G0028160.1 Rosmarinic Acid C4H low borderline
LONjap04G0028170.1 Rosmarinic Acid C4H low borderline
LONjap04G0028180.1 Rosmarinic Acid C4H low borderline
LONjap04G0030310.1 Rosmarinic Acid C4H low borderline
LONjap04G0030320.1 Rosmarinic Acid C4H medium pass
LONjap04G0031700.1 Rosmarinic Acid C4H low borderline
LONjap04G0031720.1 Rosmarinic Acid C4H low borderline
LONjap04G0033650.1 Rosmarinic Acid C4H low borderline
LONjap05G0001820.1 Rosmarinic Acid C4H low borderline
LONjap05G0008270.1 Rosmarinic Acid C4H low borderline
LONjap05G0008280.1 Rosmarinic Acid C4H low borderline
LONjap05G0008320.1 Rosmarinic Acid C4H low borderline
LONjap05G0008480.1 Rosmarinic Acid C4H low borderline
LONjap05G0009230.1 Rosmarinic Acid C4H low borderline
LONjap05G0010690.1 Rosmarinic Acid C4H low borderline