PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap05G0013450.1 Rosmarinic Acid C4H low borderline
LONjap05G0013460.1 Rosmarinic Acid C4H low borderline
LONjap05G0013850.1 Rosmarinic Acid C4H low borderline
LONjap05G0021870.1 Rosmarinic Acid C4H low borderline
LONjap05G0021880.1 Rosmarinic Acid C4H low borderline
LONjap05G0022090.1 Rosmarinic Acid C4H low borderline
LONjap05G0022240.1 Rosmarinic Acid C4H low borderline
LONjap05G0022260.1 Rosmarinic Acid C4H low borderline
LONjap05G0022290.1 Rosmarinic Acid C4H low borderline
LONjap05G0022310.1 Rosmarinic Acid C4H low borderline
LONjap05G0022410.1 Rosmarinic Acid C4H low borderline
LONjap05G0022430.1 Rosmarinic Acid C4H low borderline
LONjap05G0028970.1 Rosmarinic Acid C4H medium pass
LONjap05G0028980.1 Rosmarinic Acid C4H medium pass
LONjap05G0028990.1 Rosmarinic Acid C4H medium pass
LONjap05G0029390.1 Rosmarinic Acid C4H medium pass
LONjap05G0029400.1 Rosmarinic Acid C4H medium pass
LONjap05G0029410.1 Rosmarinic Acid C4H medium pass
LONjap05G0029530.1 Rosmarinic Acid C4H low borderline
LONjap05G0029540.1 Rosmarinic Acid C4H low borderline
LONjap05G0029560.1 Rosmarinic Acid C4H low borderline
LONjap05G0029590.1 Rosmarinic Acid C4H low borderline
LONjap05G0030390.1 Rosmarinic Acid C4H low borderline
LONjap05G0030420.1 Rosmarinic Acid C4H low borderline
LONjap05G0030440.1 Rosmarinic Acid C4H low borderline
LONjap06G0002580.1 Rosmarinic Acid C4H low borderline
LONjap06G0002590.1 Rosmarinic Acid C4H low borderline
LONjap06G0002620.1 Rosmarinic Acid C4H low borderline
LONjap06G0002630.1 Rosmarinic Acid C4H low borderline
LONjap06G0002650.1 Rosmarinic Acid C4H low borderline
LONjap06G0002660.1 Rosmarinic Acid C4H low borderline
LONjap06G0002670.1 Rosmarinic Acid C4H low borderline
LONjap06G0002680.1 Rosmarinic Acid C4H low borderline
LONjap06G0002760.1 Rosmarinic Acid C4H low borderline
LONjap06G0002770.1 Rosmarinic Acid C4H low borderline
LONjap06G0002800.1 Rosmarinic Acid C4H low borderline
LONjap06G0004470.1 Rosmarinic Acid C4H low borderline
LONjap06G0004480.1 Rosmarinic Acid C4H low borderline
LONjap06G0004620.1 Rosmarinic Acid C4H low borderline
LONjap06G0009850.1 Rosmarinic Acid C4H low borderline
LONjap06G0009890.1 Rosmarinic Acid C4H low borderline
LONjap06G0009900.1 Rosmarinic Acid C4H low borderline
LONjap06G0009910.1 Rosmarinic Acid C4H low borderline
LONjap06G0010090.1 Rosmarinic Acid C4H low borderline
LONjap06G0010100.1 Rosmarinic Acid C4H low borderline
LONjap06G0010120.1 Rosmarinic Acid C4H low borderline
LONjap06G0010180.1 Rosmarinic Acid C4H low borderline
LONjap06G0010220.1 Rosmarinic Acid C4H low borderline
LONjap06G0010400.1 Rosmarinic Acid C4H low borderline
LONjap06G0010460.1 Rosmarinic Acid C4H low borderline