PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap06G0011640.1 Rosmarinic Acid C4H low borderline
LONjap06G0023830.1 Rosmarinic Acid C4H low borderline
LONjap06G0026440.1 Rosmarinic Acid C4H low borderline
LONjap06G0026650.1 Rosmarinic Acid C4H low borderline
LONjap06G0027130.1 Rosmarinic Acid C4H low borderline
LONjap07G0001210.1 Rosmarinic Acid C4H low borderline
LONjap07G0001230.1 Rosmarinic Acid C4H medium pass
LONjap07G0001240.1 Rosmarinic Acid C4H low borderline
LONjap07G0001260.1 Rosmarinic Acid C4H low borderline
LONjap07G0001270.1 Rosmarinic Acid C4H low borderline
LONjap07G0001290.1 Rosmarinic Acid C4H low borderline
LONjap07G0001300.1 Rosmarinic Acid C4H low borderline
LONjap07G0001350.1 Rosmarinic Acid C4H low borderline
LONjap07G0001360.1 Rosmarinic Acid C4H low borderline
LONjap07G0001400.1 Rosmarinic Acid C4H low borderline
LONjap07G0001410.1 Rosmarinic Acid C4H low borderline
LONjap07G0001420.1 Rosmarinic Acid C4H low borderline
LONjap07G0005520.1 Rosmarinic Acid C4H low borderline
LONjap07G0005590.1 Rosmarinic Acid C4H low borderline
LONjap07G0006610.1 Rosmarinic Acid C4H low borderline
LONjap07G0007640.1 Rosmarinic Acid C4H low borderline
LONjap07G0010490.1 Rosmarinic Acid C4H low borderline
LONjap07G0011270.1 Rosmarinic Acid C4H medium pass
LONjap07G0016630.1 Rosmarinic Acid C4H low borderline
LONjap07G0016700.1 Rosmarinic Acid C4H low borderline
LONjap07G0018140.1 Rosmarinic Acid C4H low borderline
LONjap07G0019500.1 Rosmarinic Acid C4H low borderline
LONjap07G0022260.1 Rosmarinic Acid C4H low borderline
LONjap07G0024240.1 Rosmarinic Acid C4H low borderline
LONjap07G0026830.1 Rosmarinic Acid C4H low borderline
LONjap07G0030200.1 Rosmarinic Acid C4H low borderline
LONjap07G0030210.1 Rosmarinic Acid C4H low borderline
LONjap07G0030340.1 Rosmarinic Acid C4H low borderline
LONjap07G0030350.1 Rosmarinic Acid C4H low borderline
LONjap07G0030380.1 Rosmarinic Acid C4H low borderline
LONjap08G0000060.1 Rosmarinic Acid C4H low borderline
LONjap08G0000610.1 Rosmarinic Acid C4H low borderline
LONjap08G0000620.1 Rosmarinic Acid C4H low borderline
LONjap08G0000880.1 Rosmarinic Acid C4H low borderline
LONjap08G0000890.1 Rosmarinic Acid C4H medium pass
LONjap08G0000910.1 Rosmarinic Acid C4H medium pass
LONjap08G0001350.1 Rosmarinic Acid C4H low borderline
LONjap08G0004590.1 Rosmarinic Acid C4H low borderline
LONjap08G0004600.1 Rosmarinic Acid C4H low borderline
LONjap08G0008030.1 Rosmarinic Acid C4H low borderline
LONjap08G0008400.1 Rosmarinic Acid C4H low borderline
LONjap08G0014080.1 Rosmarinic Acid C4H low borderline
LONjap08G0014090.1 Rosmarinic Acid C4H low borderline
LONjap08G0014250.1 Rosmarinic Acid C4H low borderline
LONjap08G0014260.1 Rosmarinic Acid C4H low borderline