PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap08G0014510.1 Rosmarinic Acid C4H low borderline
LONjap08G0016170.1 Rosmarinic Acid C4H low borderline
LONjap08G0016180.1 Rosmarinic Acid C4H low borderline
LONjap08G0017990.1 Rosmarinic Acid C4H low borderline
LONjap08G0018640.1 Rosmarinic Acid C4H low borderline
LONjap08G0021530.1 Rosmarinic Acid C4H low borderline
LONjap08G0021650.1 Rosmarinic Acid C4H low borderline
LONjap08G0027010.1 Rosmarinic Acid C4H low borderline
LONjap08G0027360.1 Rosmarinic Acid C4H low borderline
LONjap08G0027370.1 Rosmarinic Acid C4H low borderline
LONjap09G0014090.1 Rosmarinic Acid C4H low borderline
LONjap09G0014100.1 Rosmarinic Acid C4H medium pass
LONjap09G0014130.1 Rosmarinic Acid C4H low borderline
LONjap09G0014140.1 Rosmarinic Acid C4H low borderline
LONjap09G0014430.1 Rosmarinic Acid C4H low borderline
LONjap09G0014790.1 Rosmarinic Acid C4H medium pass
LONjap09G0014940.1 Rosmarinic Acid C4H low borderline
LONjap09G0016210.1 Rosmarinic Acid C4H low borderline
LONjap09G0017000.1 Rosmarinic Acid C4H medium pass
LONjap09G0021250.1 Rosmarinic Acid C4H low borderline
LONjap09G0022090.1 Rosmarinic Acid C4H low borderline
LONjap09G0023510.1 Rosmarinic Acid C4H low borderline
LONjap09G0027210.1 Rosmarinic Acid C4H low borderline
LONjap09G0028050.1 Rosmarinic Acid C4H low borderline
LONjap09G0028060.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000150000290.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000150000420.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000150000430.1 Rosmarinic Acid C4H medium pass
LONjapGWHAAZE000000160000630.1 Rosmarinic Acid C4H medium pass
LONjapGWHAAZE000000180001000.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000190001220.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000200001380.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000210002240.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000210002250.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000360004390.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000360004400.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000360004410.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000530005990.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000000530006010.1 Rosmarinic Acid C4H medium pass
LONjapGWHAAZE000000770007250.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000001200014600.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000001350015300.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000001350015310.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000001360015320.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000001360015330.1 Rosmarinic Acid C4H low borderline
LONjapGWHAAZE000001360015340.1 Rosmarinic Acid C4H low borderline
LONjap01G0043850.1 Rosmarinic Acid CPR medium pass
LONjap02G0004310.1 Rosmarinic Acid CPR low borderline
LONjap03G0027700.1 Rosmarinic Acid CPR medium pass
LONjap04G0010300.1 Rosmarinic Acid CPR low borderline