PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap04G0024320.1 Rosmarinic Acid CPR medium pass
LONjap04G0025490.1 Rosmarinic Acid CPR medium pass
LONjap05G0000030.1 Rosmarinic Acid CPR medium pass
LONjap09G0000400.1 Rosmarinic Acid CPR medium pass
LONjap09G0000470.1 Rosmarinic Acid CPR medium pass
LONjap01G0029230.1 Rosmarinic Acid HPPR low borderline
LONjap02G0011980.1 Rosmarinic Acid HPPR medium pass
LONjap05G0002490.1 Rosmarinic Acid HPPR medium pass
LONjap07G0018060.1 Rosmarinic Acid HPPR medium pass
LONjap08G0014050.1 Rosmarinic Acid HPPR medium pass
LONjap09G0019710.1 Rosmarinic Acid HPPR medium pass
LONjap09G0019720.1 Rosmarinic Acid HPPR medium pass
LONjap09G0023580.1 Rosmarinic Acid HPPR medium pass
LONjap02G0000490.1 Rosmarinic Acid PAL high pass
LONjap02G0000780.1 Rosmarinic Acid PAL high pass
LONjap02G0006870.1 Rosmarinic Acid PAL high pass
LONjap02G0041350.1 Rosmarinic Acid PAL high pass
LONjap03G0029670.1 Rosmarinic Acid PAL high pass
LONjap01G0000280.1 Rosmarinic Acid RAS low borderline
LONjap01G0033110.1 Rosmarinic Acid RAS medium pass
LONjap01G0040450.1 Rosmarinic Acid RAS medium pass
LONjap01G0040460.1 Rosmarinic Acid RAS low borderline
LONjap01G0040480.1 Rosmarinic Acid RAS medium pass
LONjap01G0040520.1 Rosmarinic Acid RAS medium pass
LONjap01G0040530.1 Rosmarinic Acid RAS medium pass
LONjap01G0040540.1 Rosmarinic Acid RAS medium pass
LONjap02G0021030.1 Rosmarinic Acid RAS low borderline
LONjap02G0026190.1 Rosmarinic Acid RAS low borderline
LONjap02G0030100.1 Rosmarinic Acid RAS medium pass
LONjap02G0030230.1 Rosmarinic Acid RAS medium pass
LONjap04G0004740.1 Rosmarinic Acid RAS low borderline
LONjap04G0011790.1 Rosmarinic Acid RAS low borderline
LONjap04G0028470.1 Rosmarinic Acid RAS low borderline
LONjap05G0011650.1 Rosmarinic Acid RAS low borderline
LONjap05G0029450.1 Rosmarinic Acid RAS low borderline
LONjap05G0029470.1 Rosmarinic Acid RAS low borderline
LONjap06G0008630.1 Rosmarinic Acid RAS low borderline
LONjap07G0014640.1 Rosmarinic Acid RAS medium pass
LONjap07G0014740.1 Rosmarinic Acid RAS medium pass
LONjap07G0014760.1 Rosmarinic Acid RAS medium pass
LONjap07G0025200.1 Rosmarinic Acid RAS low borderline
LONjap08G0005880.1 Rosmarinic Acid RAS low borderline
LONjap08G0007790.1 Rosmarinic Acid RAS medium pass
LONjap08G0011800.1 Rosmarinic Acid RAS medium pass
LONjap09G0001030.1 Rosmarinic Acid RAS medium pass
LONjap09G0001190.1 Rosmarinic Acid RAS medium pass
LONjap09G0012120.1 Rosmarinic Acid RAS low borderline
LONjap09G0018620.1 Rosmarinic Acid RAS medium pass
LONjap09G0022400.1 Rosmarinic Acid RAS low borderline
LONjap09G0031820.1 Rosmarinic Acid RAS medium pass