PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap05G0002940.1 Alkaloid H6H low borderline
LONjap05G0002950.1 Alkaloid H6H low borderline
LONjap05G0002960.1 Alkaloid H6H low borderline
LONjap05G0002970.1 Alkaloid H6H low borderline
LONjap05G0013540.1 Alkaloid H6H medium borderline
LONjap05G0013550.1 Alkaloid H6H medium borderline
LONjap06G0017000.1 Alkaloid H6H low borderline
LONjap06G0017040.1 Alkaloid H6H low borderline
LONjap06G0017060.1 Alkaloid H6H medium borderline
LONjap06G0017080.1 Alkaloid H6H low borderline
LONjap06G0017110.1 Alkaloid H6H low borderline
LONjap06G0017120.1 Alkaloid H6H medium borderline
LONjap06G0017900.1 Alkaloid H6H medium borderline
LONjap07G0004080.1 Alkaloid H6H low borderline
LONjap07G0004090.1 Alkaloid H6H low borderline
LONjap07G0008500.1 Alkaloid H6H medium borderline
LONjap07G0008810.1 Alkaloid H6H medium borderline
LONjap07G0019010.1 Alkaloid H6H low borderline
LONjap07G0019020.1 Alkaloid H6H low borderline
LONjap08G0015140.1 Alkaloid H6H low borderline
LONjap08G0023770.1 Alkaloid H6H low borderline
LONjap09G0019430.1 Alkaloid H6H low borderline
LONjap09G0022850.1 Alkaloid H6H low borderline
LONjap09G0024170.1 Alkaloid H6H low borderline
LONjap09G0027370.1 Alkaloid H6H medium borderline
LONjapGWHAAZE000000940011630.1 Alkaloid H6H low borderline
LONjap01G0005710.1 Alkaloid IO low borderline
LONjap01G0005720.1 Alkaloid IO high pass
LONjap01G0005730.1 Alkaloid IO medium borderline
LONjap01G0005740.1 Alkaloid IO high pass
LONjap01G0005790.1 Alkaloid IO medium pass
LONjap01G0005810.1 Alkaloid IO high pass
LONjap01G0005850.1 Alkaloid IO medium pass
LONjap01G0005860.1 Alkaloid IO medium borderline
LONjap01G0005900.1 Alkaloid IO medium pass
LONjap01G0015720.1 Alkaloid IO medium borderline
LONjap01G0015730.1 Alkaloid IO medium pass
LONjap01G0015850.1 Alkaloid IO medium borderline
LONjap01G0015860.1 Alkaloid IO medium pass
LONjap01G0018130.1 Alkaloid IO low borderline
LONjap01G0023780.1 Alkaloid IO low borderline
LONjap01G0023930.1 Alkaloid IO low borderline
LONjap01G0037780.1 Alkaloid IO medium borderline
LONjap01G0037790.1 Alkaloid IO medium borderline
LONjap01G0037800.1 Alkaloid IO medium borderline
LONjap01G0037810.1 Alkaloid IO medium borderline
LONjap02G0007460.1 Alkaloid IO medium borderline
LONjap02G0007650.1 Alkaloid IO medium pass
LONjap02G0007660.1 Alkaloid IO medium borderline
LONjap02G0007670.1 Alkaloid IO medium borderline