PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap02G0007680.1 Alkaloid IO medium borderline
LONjap02G0022780.1 Alkaloid IO low borderline
LONjap02G0045990.1 Alkaloid IO medium borderline
LONjap03G0009250.1 Alkaloid IO medium borderline
LONjap03G0012350.1 Alkaloid IO medium borderline
LONjap03G0012480.1 Alkaloid IO medium borderline
LONjap03G0026580.1 Alkaloid IO medium borderline
LONjap03G0030870.1 Alkaloid IO medium borderline
LONjap03G0030880.1 Alkaloid IO medium borderline
LONjap04G0002630.1 Alkaloid IO medium borderline
LONjap04G0027310.1 Alkaloid IO medium borderline
LONjap04G0030310.1 Alkaloid IO medium borderline
LONjap04G0030320.1 Alkaloid IO medium borderline
LONjap05G0010690.1 Alkaloid IO medium borderline
LONjap05G0021880.1 Alkaloid IO medium borderline
LONjap05G0022090.1 Alkaloid IO medium borderline
LONjap06G0002580.1 Alkaloid IO medium borderline
LONjap06G0002590.1 Alkaloid IO medium borderline
LONjap06G0002630.1 Alkaloid IO medium borderline
LONjap06G0002640.1 Alkaloid IO medium pass
LONjap06G0002650.1 Alkaloid IO medium borderline
LONjap06G0002660.1 Alkaloid IO medium pass
LONjap06G0002680.1 Alkaloid IO medium pass
LONjap06G0002720.1 Alkaloid IO medium borderline
LONjap06G0002740.1 Alkaloid IO medium borderline
LONjap06G0002760.1 Alkaloid IO high pass
LONjap06G0002780.1 Alkaloid IO medium borderline
LONjap07G0001220.1 Alkaloid IO medium borderline
LONjap07G0006610.1 Alkaloid IO medium borderline
LONjap07G0008480.1 Alkaloid IO medium borderline
LONjap07G0008490.1 Alkaloid IO medium pass
LONjap07G0008800.1 Alkaloid IO medium pass
LONjap07G0016630.1 Alkaloid IO medium borderline
LONjap08G0000470.1 Alkaloid IO medium borderline
LONjap08G0000890.1 Alkaloid IO medium borderline
LONjap08G0007170.1 Alkaloid IO medium borderline
LONjapGWHAAZE000000640006930.1 Alkaloid IO medium borderline
LONjapGWHAAZE000001360015330.1 Alkaloid IO medium pass
LONjapGWHAAZE000001360015340.1 Alkaloid IO medium pass
LONjap01G0006790.1 Alkaloid ISY low borderline
LONjap02G0022790.1 Alkaloid ISY low borderline
LONjap03G0013560.1 Alkaloid ISY medium pass
LONjap03G0020540.1 Alkaloid ISY medium pass
LONjap03G0020550.1 Alkaloid ISY medium pass
LONjap04G0003740.1 Alkaloid ISY high pass
LONjap04G0003750.1 Alkaloid ISY medium pass
LONjap04G0003760.1 Alkaloid ISY medium pass
LONjap05G0014460.1 Alkaloid ISY high pass
LONjap05G0014470.1 Alkaloid ISY high pass
LONjap01G0017750.1 Alkaloid LAMT medium borderline