PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap01G0017800.1 Alkaloid LAMT medium borderline
LONjap01G0017810.1 Alkaloid LAMT medium pass
LONjap01G0028870.1 Alkaloid LAMT medium borderline
LONjap02G0025030.1 Alkaloid LAMT medium borderline
LONjap02G0025040.1 Alkaloid LAMT medium borderline
LONjap02G0044480.1 Alkaloid LAMT low borderline
LONjap03G0022630.1 Alkaloid LAMT medium borderline
LONjap03G0023280.1 Alkaloid LAMT low borderline
LONjap06G0021640.1 Alkaloid LAMT medium borderline
LONjap09G0002710.1 Alkaloid LAMT medium borderline
LONjap09G0013770.1 Alkaloid LAMT medium borderline
LONjap09G0013780.1 Alkaloid LAMT medium borderline
LONjap02G0012340.1 Alkaloid MPO low borderline
LONjap03G0015760.1 Alkaloid MPO medium pass
LONjap03G0016020.1 Alkaloid MPO low borderline
LONjap03G0016030.1 Alkaloid MPO low borderline
LONjap03G0016040.1 Alkaloid MPO medium pass
LONjap03G0016050.1 Alkaloid MPO medium pass
LONjap03G0016060.1 Alkaloid MPO medium pass
LONjap03G0030230.1 Alkaloid MPO high pass
LONjap03G0030240.1 Alkaloid MPO high pass
LONjap05G0008030.1 Alkaloid MPO medium pass
LONjap06G0026160.1 Alkaloid MPO high pass
LONjap09G0015130.1 Alkaloid MPO medium pass
LONjap01G0027990.1 Alkaloid NCS medium borderline
LONjap01G0032150.1 Alkaloid NCS medium borderline
LONjap02G0015760.1 Alkaloid NCS medium borderline
LONjap02G0035770.1 Alkaloid NCS medium borderline
LONjap03G0015090.1 Alkaloid NCS low borderline
LONjap03G0015100.1 Alkaloid NCS low borderline
LONjap03G0018560.1 Alkaloid NCS medium borderline
LONjap03G0018590.1 Alkaloid NCS medium borderline
LONjap03G0018600.1 Alkaloid NCS medium borderline
LONjap03G0018670.1 Alkaloid NCS medium borderline
LONjap03G0020380.1 Alkaloid NCS low borderline
LONjap03G0020390.1 Alkaloid NCS low borderline
LONjap03G0020400.1 Alkaloid NCS low borderline
LONjap03G0020410.1 Alkaloid NCS low borderline
LONjap03G0028640.1 Alkaloid NCS medium borderline
LONjap03G0028670.1 Alkaloid NCS medium borderline
LONjap04G0016440.1 Alkaloid NCS medium borderline
LONjap04G0016460.1 Alkaloid NCS medium borderline
LONjap04G0030370.1 Alkaloid NCS medium borderline
LONjap05G0003780.1 Alkaloid NCS medium borderline
LONjap06G0016360.1 Alkaloid NCS low borderline
LONjap06G0016390.1 Alkaloid NCS low borderline
LONjap06G0017020.1 Alkaloid NCS medium borderline
LONjap06G0018590.1 Alkaloid NCS low borderline
LONjap06G0018600.1 Alkaloid NCS low borderline
LONjap06G0020860.1 Alkaloid NCS medium borderline