PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap05G0029540.1 Alkaloid T3O medium pass
LONjap05G0029560.1 Alkaloid T3O medium pass
LONjap05G0029590.1 Alkaloid T3O medium pass
LONjap05G0030390.1 Alkaloid T3O medium pass
LONjap05G0030400.1 Alkaloid T3O medium pass
LONjap05G0030410.1 Alkaloid T3O medium pass
LONjap05G0030420.1 Alkaloid T3O medium pass
LONjap05G0030440.1 Alkaloid T3O medium pass
LONjap05G0030460.1 Alkaloid T3O medium pass
LONjap05G0030750.1 Alkaloid T3O medium pass
LONjap05G0030760.1 Alkaloid T3O low borderline
LONjap05G0030770.1 Alkaloid T3O low borderline
LONjap05G0030780.1 Alkaloid T3O low borderline
LONjap06G0009760.1 Alkaloid T3O medium borderline
LONjap06G0009850.1 Alkaloid T3O medium pass
LONjap06G0009880.1 Alkaloid T3O low borderline
LONjap06G0009890.1 Alkaloid T3O medium pass
LONjap06G0009900.1 Alkaloid T3O high pass
LONjap06G0009910.1 Alkaloid T3O low borderline
LONjap06G0010060.1 Alkaloid T3O low borderline
LONjap06G0010080.1 Alkaloid T3O medium pass
LONjap06G0010090.1 Alkaloid T3O medium pass
LONjap06G0010100.1 Alkaloid T3O medium pass
LONjap06G0010120.1 Alkaloid T3O medium pass
LONjap06G0010180.1 Alkaloid T3O high pass
LONjap06G0010220.1 Alkaloid T3O medium pass
LONjap06G0010240.1 Alkaloid T3O low borderline
LONjap06G0010400.1 Alkaloid T3O medium pass
LONjap06G0010460.1 Alkaloid T3O medium pass
LONjap06G0010480.1 Alkaloid T3O low borderline
LONjap06G0011640.1 Alkaloid T3O medium borderline
LONjap07G0007600.1 Alkaloid T3O medium pass
LONjap07G0007620.1 Alkaloid T3O medium pass
LONjap07G0007630.1 Alkaloid T3O medium pass
LONjap07G0007640.1 Alkaloid T3O medium pass
LONjap07G0010490.1 Alkaloid T3O medium pass
LONjap07G0011270.1 Alkaloid T3O medium borderline
LONjap07G0017370.1 Alkaloid T3O medium pass
LONjap07G0018140.1 Alkaloid T3O low borderline
LONjap07G0023850.1 Alkaloid T3O medium pass
LONjap07G0030200.1 Alkaloid T3O medium pass
LONjap07G0030210.1 Alkaloid T3O medium pass
LONjap07G0030340.1 Alkaloid T3O medium pass
LONjap07G0030350.1 Alkaloid T3O medium pass
LONjap07G0030380.1 Alkaloid T3O medium pass
LONjap08G0000060.1 Alkaloid T3O medium pass
LONjap08G0001350.1 Alkaloid T3O low borderline
LONjap08G0008030.1 Alkaloid T3O medium pass
LONjap08G0013820.1 Alkaloid T3O medium pass
LONjap08G0014510.1 Alkaloid T3O medium borderline