PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
LONjap08G0017990.1 Alkaloid T3O medium pass
LONjap08G0018650.1 Alkaloid T3O low borderline
LONjap08G0018670.1 Alkaloid T3O medium pass
LONjap08G0018680.1 Alkaloid T3O medium pass
LONjap08G0021530.1 Alkaloid T3O medium pass
LONjap08G0021540.1 Alkaloid T3O medium pass
LONjap08G0021650.1 Alkaloid T3O medium pass
LONjap08G0021660.1 Alkaloid T3O medium pass
LONjap09G0014790.1 Alkaloid T3O medium borderline
LONjap09G0016210.1 Alkaloid T3O medium pass
LONjap09G0017000.1 Alkaloid T3O medium borderline
LONjap09G0018930.1 Alkaloid T3O low borderline
LONjap09G0022090.1 Alkaloid T3O medium pass
LONjap09G0024230.1 Alkaloid T3O low borderline
LONjap09G0028050.1 Alkaloid T3O medium pass
LONjapGWHAAZE000000150000430.1 Alkaloid T3O medium borderline
LONjapGWHAAZE000000160000630.1 Alkaloid T3O medium borderline
LONjapGWHAAZE000000200001380.1 Alkaloid T3O medium pass
LONjapGWHAAZE000000210002250.1 Alkaloid T3O medium borderline
LONjapGWHAAZE000000360004550.1 Alkaloid T3O medium pass
LONjapGWHAAZE000000770007250.1 Alkaloid T3O medium pass
LONjapGWHAAZE000001080013400.1 Alkaloid T3O low borderline
LONjap07G0010480.1 Alkaloid TDC low borderline
LONjap09G0007330.1 Alkaloid TDC low borderline
LONjap01G0000440.1 Alkaloid TRI/TRII medium pass
LONjap01G0007210.1 Alkaloid TRI/TRII medium pass
LONjap01G0009760.1 Alkaloid TRI/TRII medium pass
LONjap01G0009770.1 Alkaloid TRI/TRII medium pass
LONjap01G0009780.1 Alkaloid TRI/TRII medium pass
LONjap01G0009790.1 Alkaloid TRI/TRII medium pass
LONjap01G0032220.1 Alkaloid TRI/TRII medium pass
LONjap01G0037620.1 Alkaloid TRI/TRII medium pass
LONjap01G0037630.1 Alkaloid TRI/TRII medium pass
LONjap01G0037640.1 Alkaloid TRI/TRII medium pass
LONjap01G0042330.1 Alkaloid TRI/TRII low borderline
LONjap01G0048830.1 Alkaloid TRI/TRII medium pass
LONjap02G0000600.1 Alkaloid TRI/TRII low borderline
LONjap02G0003930.1 Alkaloid TRI/TRII medium pass
LONjap02G0005410.1 Alkaloid TRI/TRII medium pass
LONjap02G0005420.1 Alkaloid TRI/TRII medium pass
LONjap02G0014290.1 Alkaloid TRI/TRII medium pass
LONjap02G0019790.1 Alkaloid TRI/TRII medium pass
LONjap02G0020310.1 Alkaloid TRI/TRII medium pass
LONjap02G0035680.1 Alkaloid TRI/TRII medium pass
LONjap02G0035920.1 Alkaloid TRI/TRII medium pass
LONjap02G0038770.1 Alkaloid TRI/TRII low borderline
LONjap02G0048840.1 Alkaloid TRI/TRII medium pass
LONjap03G0027420.1 Alkaloid TRI/TRII medium pass
LONjap03G0028560.1 Alkaloid TRI/TRII medium pass
LONjap03G0028570.1 Alkaloid TRI/TRII medium pass