PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
LONjap03G0000320.1 Alkaloid 7DLGT low borderline
LONjap03G0000330.1 Alkaloid 7DLGT medium pass
LONjap03G0002760.1 Alkaloid 7DLGT low borderline
LONjap03G0002770.1 Alkaloid 7DLGT low borderline
LONjap03G0002780.1 Alkaloid 7DLGT low borderline
LONjap03G0002790.1 Alkaloid 7DLGT low borderline
LONjap03G0002800.1 Alkaloid 7DLGT low borderline
LONjap03G0002810.1 Alkaloid 7DLGT low borderline
LONjap03G0002820.1 Alkaloid 7DLGT low borderline
LONjap03G0002830.1 Alkaloid 7DLGT low borderline
LONjap03G0002860.1 Alkaloid 7DLGT low borderline
LONjap03G0002870.1 Alkaloid 7DLGT low borderline
LONjap03G0002900.1 Alkaloid 7DLGT low borderline
LONjap03G0002910.1 Alkaloid 7DLGT low borderline
LONjap03G0003360.1 Alkaloid 7DLGT low borderline
LONjap03G0003370.1 Alkaloid 7DLGT low borderline
LONjap03G0003380.1 Alkaloid 7DLGT low borderline
LONjap03G0003520.1 Alkaloid 7DLGT low borderline
LONjap03G0005870.1 Alkaloid 7DLGT low borderline
LONjap03G0005880.1 Alkaloid 7DLGT medium pass
LONjap03G0005890.1 Alkaloid 7DLGT low borderline
LONjap03G0006450.1 Alkaloid 7DLGT medium pass
LONjap03G0006480.1 Alkaloid 7DLGT medium pass
LONjap03G0006490.1 Alkaloid 7DLGT low borderline
LONjap03G0006760.1 Alkaloid 7DLGT low borderline
LONjap03G0006840.1 Alkaloid 7DLGT low borderline
LONjap03G0026550.1 Alkaloid 7DLGT low borderline
LONjap03G0026560.1 Alkaloid 7DLGT low borderline
LONjap03G0030180.1 Alkaloid 7DLGT medium pass
LONjap03G0030190.1 Alkaloid 7DLGT medium pass
LONjap03G0030200.1 Alkaloid 7DLGT medium pass
LONjap03G0030210.1 Alkaloid 7DLGT medium pass
LONjap04G0000020.1 Alkaloid 7DLGT low borderline
LONjap04G0003450.1 Alkaloid 7DLGT low borderline
LONjap04G0004700.1 Alkaloid 7DLGT low borderline
LONjap04G0005320.1 Alkaloid 7DLGT medium pass
LONjap04G0005340.1 Alkaloid 7DLGT medium pass
LONjap04G0005350.1 Alkaloid 7DLGT medium pass
LONjap04G0005360.1 Alkaloid 7DLGT high pass
LONjap04G0006260.1 Alkaloid 7DLGT low borderline
LONjap04G0006270.1 Alkaloid 7DLGT low borderline
LONjap04G0006280.1 Alkaloid 7DLGT low borderline
LONjap04G0006300.1 Alkaloid 7DLGT low borderline
LONjap04G0006540.1 Alkaloid 7DLGT medium pass
LONjap04G0010400.1 Alkaloid 7DLGT medium pass
LONjap04G0026580.1 Alkaloid 7DLGT medium pass
LONjap04G0026600.1 Alkaloid 7DLGT medium pass
LONjap04G0026620.1 Alkaloid 7DLGT low borderline
LONjap04G0026640.1 Alkaloid 7DLGT medium pass
LONjap04G0026660.1 Alkaloid 7DLGT medium pass